KEGG   Vitis vinifera (wine grape): 100248517
Entry
100248517         CDS       T01084                                 
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic isoform X1
  KO
K10956  protein transport protein SEC61 subunit alpha
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03060  Protein export
vvi04141  Protein processing in endoplasmic reticulum
vvi04145  Phagosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    100248517
   04141 Protein processing in endoplasmic reticulum
    100248517
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100248517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100248517
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vvi02044]
    100248517
Membrane trafficking [BR:vvi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   SEC61 complex
    100248517
Secretion system [BR:vvi02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   100248517
SSDB
Motif
Pfam: SecY TssN
Other DBs
NCBI-GeneID: 100248517
NCBI-ProteinID: XP_002262945
UniProt: F6H9M6
Position
11:complement(join(13158182..13158412,13159343..13159506,13170069..13170192,13178283..13178372,13178457..13178756,13188671..13189056,13189157..13189314,13193306..13193493))
AA seq 546 aa
MMITVREASSSALCFNLNLSRSSHPASTASPRLRNSVSRASFAVHTKPNSTPNSWNLALF
CNSCKGPVFDPLGIDSDKSLGLNATWESALGLLSQTFGSTSSTKKDKSASGQGVAAAIED
SSIDFGDFFKGPLPGKFLKLLGLLALSRLGVYVPLGGVNREAFVGNLDQNSLLTTLDSFS
GGGIGRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGETGRKKVLQYTRYASVGF
ALVQAIGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFT
SIISYLPASFGRTVAQAFQDGNYIGLVIIIISFFLLVLGIVYVQEAERKIPLNYASRYTN
RTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTVSRFTGLAALKKAALALNPGGSLYL
PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKMVLSRISVLGS
GFLAILAAGPSLVEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD
IDRLGR
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgatgataacggtgagagaagcttcttcctctgccctctgcttcaacctcaacctctcg
aggtcctctcatcccgcttccactgcctctccaagactacgaaactccgtctcaagagcc
agctttgctgtccacacaaaacccaacagcacgccgaattcatggaaccttgctctcttt
tgcaacagctgcaaaggcccagtttttgacccattgggcatcgattcagataaatctttg
ggtctcaatgctacctgggagagtgccctaggtttactgtcacaaacatttgggagtacc
tcaagtacaaagaaggataaatcagcttcaggtcaaggagtggcagctgcaattgaggat
agttccattgactttggggacttcttcaaagggccattaccaggaaaatttctaaagctt
ttggggttattggccttatcccgccttggagtctatgtacctcttggtggtgtaaacagg
gaggcctttgttggcaatttagatcagaacagtttgttgaccactttagattcattttct
ggaggcggcattggtcgacttgggatatgctcccttggcattgttccctttatcaatgca
cagattgtatttcagcttctcactcaaatttatcccaagttgcaagaccttcagaaaaga
gaaggtgaaacaggaagaaaaaaagttcttcagtatactcgctatgcttcagtaggtttt
gctctagtgcaggcaattgggcaagtactttttctccggccctatgtcaatgactttagt
acacagtgggttctatcttctgttactttattgactcttggatcagtacttactacatat
attggggaaaggatctctgacctaaaacttggaaatggtacatcccttctaatcttcaca
agcatcatctcctacttgccagcttcttttggtaggacggttgcacaggcatttcaggat
ggtaactacattggactcgtcatcatcataatctccttcttcctcttagtccttggtatt
gtgtatgttcaggaagcagagaggaaaattccacttaattatgcatcaagatataccaac
agaactggaggccttcaaaaatctgcttacctccctttcaaggtgaatagttctggggta
atgccgatcatattttctacatcatcattggctcttcctggtactgtgtcacgctttact
ggattagctgcactaaagaaggctgcattggctttaaatcctgggggttctctttatctc
ccaaccaacatacttctgatagccttcttcaactactattacactttcctacaattggac
cctgatgatgtgagtgaacagttgaaacgtcaaggtgcatcaatcccacttgtgcgaccc
ggtaaaagtacagctgcatttattaaaatggtactgagtcggatatcagttcttggatct
gggtttttggcaatactggctgctggtccctccttggttgaacaaaccacgcacctgaca
gcatttcgggggtttgcaggcacgtctgttctcatccttgttggttgtgctacagacaca
gcaaggaaagtccaagcagagataatttcccagaaatataagaacatagaattttatgac
attgacaggttaggccgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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