KEGG   Vitis vinifera (wine grape): 100261441
Entry
100261441         CDS       T01084                                 
Name
(RefSeq) cell division control protein 48 homolog C
  KO
K14571  ribosome biogenesis ATPase
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100261441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvi03009]
    100261441
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    100261441
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 AAA_22 AAA_16 AAA_14 AAA_2 TIP49 Nucleolin_bd RNA_helicase nSTAND3 AAA_28 AAA_17 AAA_18 AAA_33 IstB_IS21 Bac_DnaA Mg_chelatase NACHT Parvo_NS1 ATPase_2 Viral_helicase1 Zeta_toxin AAA_3 Rad17 NB-ARC ABC_tran AAA_19 TsaE AAA_11 Cytidylate_kin2 AAA_7 ATP-synt_ab CPT SR-25
Other DBs
NCBI-GeneID: 100261441
NCBI-ProteinID: XP_002266185
UniProt: F6HG51
Position
1:join(24392647..24393619,24394248..24394864,24398200..24398352,24399897..24400013,24400112..24400216,24401870..24401935,24402056..24402120,24402203..24402404,24402560..24402691,24402801..24402848)
AA seq 825 aa
MIGFDRVLVHRLQSCKDNYQTLDAIINHLCRKYPEYSRKKRQPFTRLVQQALESLQQPHR
STKKKKNEPLTSNLDDDNQEFSDSARTRKRPKKINESEERLVRRELEHYRRMQRDQERPS
TSSDSDSDSDSNSSSSSSCDSEDGAVSTSENADAIYEEKVEPECDLMKEMMRATYAKSAS
KNVESKNENPRLIEDKNIELEVGDKQKSKIGMVEGGGVGKGLGKGSKKEVKGSVSTGVEV
SGKDGPMFSDLGGMKSVVEDLKMEVIVPLYYPELPRWLGVRPMAGILLHGPPGCGKTKLA
HAIANETKVPFYKISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKREN
LNREMERRIVTQLMTCMDESNRLVQPADGDKESEISHHKPGYVLVIGATNRPDAVDPALR
RPGRFDREIALGVPDESARADILSVITRNLRLEGSFDLAKLARSTPGFVGADLAALANKA
GNLAMKRIIDRRKFELSRELTDEEHIEDWWRQPWLPEEMEKLSITMADFEEAAKMVQPSS
RREGFSTIPNVRWEDVGGLDFLRQEFDRYIVRRIKYPEDYEEFGVDLETGFLLYGPPGCG
KTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALT
TKRGKEGGWVVERLLNQLLIELDGADQRRGVFVIGATNRPEVMDRAVLRPGRFGKLLYVP
LPSPDERGLILKALARKKPIDASVDLIAIGQKEACNNLSGADLSALMNEAAMAALEEKLA
DCSSGAISWTINAKHFDQALGKISPSVSNKQKHFYQVLSESFKAE
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgataggattcgatcgggtccttgtccatcgtctccagtcttgcaaagacaactaccaa
accctagacgccatcatcaaccatctctgcaggaaatacccggagtacagtcgcaagaag
cgccagcctttcaccagactcgtccaacaagccctagagtcattgcagcaaccccaccgc
agcaccaagaaaaagaagaacgaacccttgacctcaaatctcgatgatgacaaccaagag
ttcagtgacagcgcccgcactcgtaagaggcccaagaagattaatgagagcgaagagaga
ttggtccgtcgggaattggagcactaccggaggatgcagagggatcaggaacgtccatcc
acgtcttcggattcggactcggattcggattcgaattcgagttcgagttccagttgtgat
agcgaagatggcgcggtgtcgacgtccgaaaatgcagatgccatctatgaggagaaggtg
gagccggagtgtgatttgatgaaggagatgatgcgagcgacgtacgccaagtcggcttcg
aaaaatgtggagtccaaaaatgaaaatccgagactgattgaagacaagaatatcgaattg
gaggtcggtgataagcagaagagtaagattggtatggtagaaggaggtggagttgggaag
ggattggggaagggctcgaagaaagaagtgaagggttctgtttcgaccggtgttgaggtg
agtggaaaggatggaccgatgtttagtgaccttggagggatgaaaagcgtggtggaggac
ttgaagatggaagtgattgttccgctgtattatccagaattgcctcgttggttgggagta
cgcccaatggcgggaattttgttgcacgggccgcctggttgtggaaagaccaagttggct
catgccattgctaatgagactaaagttccattttacaagatatcagcgactgaggtggtc
tctggtgtatcaggtgcatcagaagagaatattagggagcttttctcaaaagcatacagg
accgcaccatcaattgttttcattgatgaaattgatgcaattgcctcaaaaagagaaaac
ctaaatagggagatggagcgacggattgtgacacagttgatgacttgcatggatgaatcc
aacagacttgtacaacctgctgatggagataaagaatcagaaatctctcatcacaaacct
ggttatgtacttgttataggagccactaataggcctgatgctgttgaccctgcactaagg
aggccagggcgttttgatcgtgagattgctttaggtgttccggatgaaagtgctagggct
gatattctttcagtaattacacgcaatcttagacttgagggttctttcgatcttgcaaaa
ttagctaggtccacaccagggtttgttggagctgatttggcagcactggccaacaaggct
ggtaaccttgccatgaagagaattatagacagaagaaagtttgagctgtctagagaacta
acagatgaagaacatattgaagattggtggaggcagccatggttgcctgaagagatggaa
aaacttagcattacaatggcagattttgaggaagcagctaaaatggttcagccctcttct
agaagagaaggattctctaccattccaaatgtaaggtgggaagatgttggagggcttgat
tttttaaggcaggaatttgaccgttacatagttaggcgtattaaataccctgaggattat
gaggaatttggtgtggatttagagacaggatttttgctttatgggcctcctggctgtggt
aaaacactaattgccaaggctgttgcaaatgaagcaggggccaatttcatacatattaag
ggccctgaacttctgaataaatatgttggagaaagtgagctggcagttaggacgctattt
agtcgagcaaggacatgttctccatgcatactattttttgatgaggtggatgctttgaca
acaaagcgtgggaaggaagggggatgggttgttgagcggcttctaaaccagctattgata
gagttagatggtgcagatcagcggcggggtgtttttgttattggtgccacaaatagacct
gaggtgatggaccgtgccgtgttacggcctggtaggtttgggaaacttctttatgtacct
ttgcctagtccggatgagcgtgggttgatcctaaaagctcttgctaggaagaagcctata
gatgccagtgtggatttgattgccataggacagaaagaggcttgtaacaatctaagtggg
gctgatctttctgcactgatgaatgaagcagccatggctgctctggaagagaaactcgca
gattgcagttcaggtgcaatttcatggactataaatgcaaaacattttgaccaagcactt
gggaaaatctctccatctgtctcaaacaagcaaaaacacttctaccaggttttgtcagaa
agcttcaaagcagaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (36)   
   Pfam (36)   
All databases (71)   

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