KEGG   Vitis vinifera (wine grape): 100263951
Entry
100263951         CDS       T01084                                 
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30A
  KO
K12900  serine/arginine-rich splicing factor 10
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100263951
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vvi01009]
    100263951
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvi03041]
    100263951
Protein phosphatases and associated proteins [BR:vvi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100263951
Spliceosome [BR:vvi03041]
 Common components
  Common spliceosomal components
   SR proteins
    100263951
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 100263951
NCBI-ProteinID: XP_002285703
UniProt: F6GUK3
Position
6:join(888556..888704,890215..890292,891134..891298,892182..892310,892791..893007)
AA seq 245 aa
MRGRSYSPSPPRGYGRRGRSPSPRGRYGGRGSARDLPTSLLVRNLRHDCRGEDLRRPFGQ
FGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTVVFAEENRKK
PSDMRARERGRGRFYDRRRSPLRYSRSPPPRHARSPSRGRDYYSPSPKRRQYSRSVSPQD
RRYSRDRSYTPDGRRRSYTRSPPYNGSRSRSQSPIRGESPSRLQSRSPDPEDYPREAVRD
RSPSE
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaggggaaggagttacagtccctcgccaccaaggggctatggccgaagggggcggagc
cctagcccaagaggccgttatggtggtcgtggtagtgctagagatctcccgactagtctt
ctagttcgcaaccttcgtcatgattgcaggggtgaagaccttcgaaggccatttgggcag
tttggtcctcttaaggatatttacttgcccagggattattatactggggaaccgaggggc
tttggttttgtccaatatgtggaccctgctgatgctgcagaagctaaatatcaaatggat
ggtcagattcttcatggccgggagttgactgttgtatttgcggaggagaataggaagaaa
ccttctgatatgagggcaagagagcgtggaaggggtcgattttatgatcgaagaaggtct
ccccttcgttattcccgatccccaccgccacggcacgcaagatctccgtcccgtggacgt
gattattattccccttcacctaagcggcgacagtactcaaggtctgtttccccacaagat
aggaggtacagtcgagataggtcatacacgcctgatggtaggaggaggtcgtacacccgt
tcaccaccctacaatggttctaggagccgcagccagagcccaataaggggtgaaagtccg
agcaggctccaaagccgtagcccagatcctgaagattacccacgagaagcagtgagagat
aggtctcccagtgagtga

  All links  
Gene (17)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

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