KEGG   Vibrio vulnificus 93U204: VV93_v1c01960
Entry
VV93_v1c01960     CDS       T03294                                 
Name
(GenBank) type II secretory pathway, component EpsD
  KO
K02453  general secretion pathway protein D
Organism
vvl  Vibrio vulnificus 93U204
Pathway
vvl03070  Bacterial secretion system
vvl05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vvl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VV93_v1c01960
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VV93_v1c01960
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vvl02044]
    VV93_v1c01960
Secretion system [BR:vvl02044]
 Type II secretion system
  General secretion pathway protein
   VV93_v1c01960
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: AIL69295
UniProt: A0A1W6M064
Position
I:220696..222717
AA seq 673 aa
MKHWFSKSAWLLAGTLACSSGVLANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMENGVLKVVKSKDSKTSAIPVVSDDTVKG
DNVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIK
RVDQAGDTEIEVVELGNASAAEMVRIVDALNRTTDAKNTPEFLQPKLVADERTNSILISG
DPKVRDRLKRLIRQLDVEMASKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKNSGQKGA
SSQRNDVVIAAHQGTNSLVLTAPPDIMLALQDVITQLDIRRAQVLIEALIVEMAEGDGVN
LGVQWGNLETGAMIQYSNTGASIGQVMIGLEEAKDTTKTESRWDPDKNQWVDRQYTEKGD
YSTLASALSKVNGAALSVVMGDWTALISAVSSDSNSNILSSPSITVMDNGEASFIVGEEV
PVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGAVDV
RFAKRQLNTSVIVQDGQMLVLGGLIDERALESESKVPLLGDIPVLGHLFKSTNTQVEKKN
LMVFIKPTIIRDGMTADGITQRKYNYIRAEQLYKADQGLKLMDDGHIPVLPKFGEDKRHP
AEIQAFIDQMEQQ
NT seq 2022 nt   +upstreamnt  +downstreamnt
gtgaaacattggtttagcaaaagcgcttggttactcgcaggtaccttagcctgctcaagc
ggcgtgctggcaaacgagtttagtgcaagctttaaaggcaccgatattcaagagttcatc
aatattgtcggtcgaaacttagaaaagaccatcattgtcgacccttcggtgcgaggcaaa
attgatgtacgcagctacgacgtattaaatgaagagcagtactacagctttttcctaaac
gtacttgaagtgtatggctacgcggtggttgaaatggaaaatggcgtactcaaggtcgtc
aaatccaaagattccaaaacctccgccattcctgtggtcagtgatgacacagtgaagggc
gacaatgtcattacacgcgtggttgcagtgcgcaatgtctccgtgcgagagctgtctcct
ttgctacgccaactgattgataatgcgggcgctggtaacgtggtgcactatgatccggcc
aatatcatcttgatcacgggccgtgcagcggtagtgaatcgtttggcagaaatcatcaaa
cgtgtggaccaagcgggtgacaccgaaatcgaagtggtagagctaggtaatgcgtcggcg
gcggaaatggtccgtattgttgatgcgctaaaccgcactaccgatgcgaaaaacacccca
gaatttttgcagccaaaattggtggccgatgagcgcaccaactcgatattgatttcgggt
gatcccaaagtgcgtgatcgcttgaagcgtttgattcgccaacttgatgtggaaatggcg
agcaaaggcaacaaccgtgttgtttacctcaagtacgccaaagcggaagacttagtcgac
gtattgaaaggggtctcagacaacttacaagcagagaaaaactctggtcaaaagggcgcg
tcttcacagcgcaacgatgtggtgatcgccgctcaccaaggcaccaactcgctggtgctg
actgcgccacccgatattatgttggcgctgcaagatgtgattacccaattagatattcgc
cgcgcacaagtgctgattgaagccttgattgtcgaaatggccgagggcgatggtgtgaac
ttgggtgttcaatggggtaacctggaaacgggtgcgatgatccagtacagcaacacaggg
gcatcgattggccaagtaatgattggtctagaggaagcaaaggatacaactaagactgaa
agccgttgggatccagataaaaatcagtgggtggatcgtcagtacactgaaaaaggggac
tattcaacactggcttctgcattgtctaaggtcaatggcgcggccctcagtgtcgtgatg
ggtgactggacggcgttgattagcgcggtatcgagtgattccaactcaaatatcctgtct
tccccaagtattaccgtaatggataacggtgaagcctcatttattgtgggtgaagaagta
ccggtcatcacaggctccacagcggggtccaataacgacaacccattccaaaccgttgac
cgcaaagaagtgggcatcaagcttaaagtggtgccacaaattaacgaaggcgactcggtt
caactgaatattgaacaggaagtgtcaaacgttttgggtgccaatggcgcggtggacgta
cgttttgctaagcgtcagctcaatacctcggtgattgtgcaagatggccaaatgttggtg
ctcggcggcttgattgatgaacgtgcgctagagagtgaatcaaaagtgccactgctaggg
gatattcccgtgctggggcatttgtttaaatcaaccaatactcaagttgaaaagaaaaac
ctgatggtgttcatcaagccaactatcattcgtgatggcatgacggccgatggtattacc
cagcgtaagtacaactacattcgcgccgaacagctctacaaagcggatcagggccttaaa
ttgatggatgatggccacattcctgtgttgccgaaatttggtgaagacaaacgccatccg
gctgaaattcaagcctttatcgatcaaatggaacagcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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