KEGG   Vibrio vulnificus MO6-24/O: VVMO6_00605
Entry
VVMO6_00605       CDS       T01415                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
vvm  Vibrio vulnificus MO6-24/O
Pathway
vvm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VVMO6_00605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvm03019]
    VVMO6_00605
   03016 Transfer RNA biogenesis [BR:vvm03016]
    VVMO6_00605
Enzymes [BR:vvm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     VVMO6_00605
Messenger RNA biogenesis [BR:vvm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     VVMO6_00605
Transfer RNA biogenesis [BR:vvm03016]
 Prokaryotic type
  tRNA degradation factors
   VVMO6_00605
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 S1_2 DUF3016 SLS1_KH2
Other DBs
NCBI-ProteinID: ADV85627
Position
I:683655..685781
AA seq 708 aa
MFEKPVVKTFQYGNHTVTLETGVIARQATAAVMVTMDDTAVFVSVVGKKEAVPGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPEGFNNEVQVIATVVS
VNPDVQPDIPTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSNTELNASRLDLVV
AGTESAVLMVESEADNLTEEEMLSAVVFGHDQQQAVIKAINEFAAEVATPSWNWVAPEAN
TALNEKVADLAEAKLVEAYKITEKMARYDRIHEIAAEVNAVILAEDPEADAKEIHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQ
RDAQIIDELTGEKKDYFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSID
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTSTGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDQ
AISGARDDISEFAPRIHTMKISADKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAA
TEGAAAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRV
EKVSDYLTEGQEVQVKVLEIDRQGRVRLSMKEAVEKPVEAEAPAAEEE
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgttcgaaaaaccagttgttaaaacgttccagtacggtaaccacacggttactctagaa
actggcgttatcgcacgtcaagcaaccgctgctgttatggttactatggatgacactgca
gtatttgtttctgttgtcggtaagaaagaagcagttccaggtcaggacttcttccctcta
accgtaaactaccaagagcgtacttacgctgcaggtaaaatcccaggtggtttcttcaag
cgtgaaggccgtccttctgaaggtgaaacgctgactgctcgtctaatcgaccgcccaatt
cgtcctctattccctgagggttttaataacgaagtacaagttatcgcaacggtagtatct
gttaacccagacgtacagccagatatcccaacaatgattggtacctctgcagcgcttgct
atttctggtatcccattcaacggtcctatcggcgcggcacgtgttggtcacattgacggt
caacttgtactaaacccaagcaacactgaactaaacgcatctcgtctagatcttgttgtt
gcgggtactgaatctgcagtgctaatggttgagtcagaagctgacaacctaactgaagaa
gaaatgctatctgcagtggtatttggtcacgaccaacaacaagcagtgatcaaagcgatc
aacgaatttgcagcagaagttgcgacgccatcttggaactgggttgctcctgaagcgaac
acagctcttaacgagaaagtggcggatctagcagaagcgaaacttgttgaagcttacaaa
atcactgaaaagatggctcgttacgaccgtatccatgagattgcggcagaggttaatgca
gttatccttgctgaagatccagaagcagatgcaaaagaaattcacactatcttccacgat
cttgagaagacggttgtgcgtcgtagcatcattgctggtaacccacgtatcgatggccgt
gaaaaagacatggttcgtgcactagatgtacgtactggcgttcttccacgtactcacggt
tcttcactattcactcgtggtgagactcaggcgctcgtaacggcgacgctaggtactcaa
cgtgatgcgcaaatcatcgacgagctaacgggtgagaagaaagattacttcctactacac
tacaacttccctccatactgtgtaggcgaaacgggttttgtaggttctccgaagcgtcgt
gaaatcggtcacggtaaacttgcgaagcgtggtattgctgcagtaatgccatcaatcgat
gagttcccatacacagtacgtgttgtttcagaaatcacagaatctaacggttcatcttca
atggcttctgtatgtggtacttctctagcgcttatggacgctggtgtgccaatcaaggct
tctgttgctggtatcgcaatgggtctggttaaagaaggcgacgattttgttgttctttca
gatatccttggtgacgaagaccacctaggtgatatggactttaaagttgcgggtacttct
actggtatcactgcacttcaaatggacatcaagatcgaaggtatcacaaaagagatcatg
caaattgcgcttaaccaagctcaaggcgcgcgtaagcacatcctatctgtgatggatcaa
gctatctctggtgctcgtgacgatatctctgaattcgctcctcgcatccacacgatgaag
atcagcgcagacaagatcaaagacgttatcggtaaaggtggcgcagtgatccgtgctcta
actgaagagacaggcacaaccatcgaaatcgaagatgacggtactatcaagattgcagca
acagaaggtgcggcagcgaaagaagcgatccgtcgtattcaagagatcaccgctgaagtt
gaagtgggcgtaatctacacaggtaaagtagctcgcctagctgattttggtgcgttcgta
acgattcttccaggtaaagatggtcttgttcacatttctcaaatcgctgacaagcgtgta
gagaaagtgtctgactacctaactgaaggtcaagaagttcaagttaaagtacttgaaatc
gaccgccaaggccgcgttcgtctaagcatgaaagaagcggtagaaaagccagttgaagca
gaagcgccagcggcagaagaagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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