KEGG   Vibrio vulnificus MO6-24/O: VVMO6_03015
Entry
VVMO6_03015       CDS       T01415                                 
Name
(GenBank) ADA regulatory protein
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
vvm  Vibrio vulnificus MO6-24/O
Pathway
vvm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vvm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VVMO6_03015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vvm03000]
    VVMO6_03015
   03400 DNA repair and recombination proteins [BR:vvm03400]
    VVMO6_03015
Enzymes [BR:vvm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     VVMO6_03015
Transcription factors [BR:vvm03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    VVMO6_03015
DNA repair and recombination proteins [BR:vvm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VVMO6_03015
SSDB
Motif
Pfam: Ada_Zn_binding AlkA_N HTH_18 HTH_AraC HhH-GPD HTH_23 Sigma70_r4 HTH_28 HTH_3 HTH_Tnp_ISL3 MerR_1
Other DBs
NCBI-ProteinID: ADV88037
Position
II:32723..34108
AA seq 461 aa
MAILNYSSLTTEQCQQARMARDSRFDGLFYVAVKSTGIFCRPVCPANLPKEENVEYYHDK
AQALSAGYRPCLRCRPDSAPDSWAWKGVETTFQRALSLIEQGVLQTETLSALAQRLGVSD
RYIRQLFRRYLGISPKQYAQSQQLLFAKQLLHGSSLSVTEIGFASGFNSTRRFNDAFQKS
MGMPPSKIRRSKGVSSHDQSHIVLAFRGDLNAKHMLDFYRQRAIESVEVVTETSYQRQVV
INGKTVGFRAEFPATFPAEKRQLVVYFSMDDLTLLRPMVAGIRRMFDLDCDTRVIEAHLN
TVAPGLVKSVGIRIPGVWSVWEAGVRAILGQQVSVKAAIGQLNLLVATLHPDSEVCTFPS
PQQVVDADLHFLRMPQSRKETLRRFAAMMLENEHADPNQWLALKGIGPWTVSYAQLRGLS
QPDRLLEKDLVVKKALAQFPTLNQESASPWGSYATFHLWNQ
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggccattttaaactactcatcgctcacgacagagcagtgtcaacaagcaaggatggcc
cgagatagtcgctttgatgggctgttttatgtagcggtcaaaagcactgggattttctgc
cggcctgtatgtcctgccaatttacccaaagaagagaacgttgagtattaccacgataaa
gcgcaagccttgtcggctggctaccgcccatgtttgcgttgtcgccccgacagcgcgcct
gattcttgggcgtggaaaggggtcgaaaccacatttcaacgtgcgttgagcttgattgaa
caaggggtgctacaaacggagacattgtcagctttggcgcaacgtttaggagtgagtgat
cgctatattcgtcaattatttcgccggtatttggggatctctccgaagcaatacgctcag
tctcagcagttgttgtttgccaaacagttgttgcatggtagctcattgagcgttaccgaa
attggctttgcttccggctttaacagtactcgccgttttaatgatgcgtttcaaaagtcg
atgggtatgcccccttcgaaaatccgtcgaagtaaaggagtttcgagtcacgatcagtcg
catatcgtgctcgcgtttcgcggtgatttgaacgcaaaacacatgctggatttttatcgg
cagcgagcgattgaaagcgtagaggtggtgacggagacgagttatcaacgccaagtcgtg
atcaacggaaaaacggttgggtttcgcgcggaatttcccgcaacatttccagcagagaag
cggcaattagtggtgtatttttcgatggatgatctgacgttgttgcgcccgatggtggct
ggaataaggcggatgttcgatctcgattgcgacacacgcgtgattgaagcccatctcaac
actgtagcgcctgggttggtcaaaagcgttggtatccggattccgggtgtctggagtgtt
tgggaagcgggcgtacgagcgattttgggccaacaagtctcggtcaaagccgccatcgga
caactgaatctattggtcgcgactttacaccccgattctgaagtgtgcacttttccttca
ccacaacaggtggttgatgcggatctgcatttcttacgaatgccacaaagtcgaaaagaa
accttaagacgttttgctgccatgatgctggagaatgaacacgccgatcccaatcaatgg
ttggcgttaaaaggcattgggccgtggacggtcagttatgcccaattgcgaggcctttcg
cagccagacagactgctagagaaggatttagtggtgaaaaaagcactggctcagttcccc
actttgaatcaagaaagcgcttcaccttgggggagttacgcaacttttcatctatggaat
caataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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