KEGG   Vibrio vulnificus MO6-24/O: VVMO6_04068
Entry
VVMO6_04068       CDS       T01415                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
vvm  Vibrio vulnificus MO6-24/O
Pathway
vvm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VVMO6_04068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvm03019]
    VVMO6_04068
Messenger RNA biogenesis [BR:vvm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     VVMO6_04068
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 P-loop_SecA AAA_22 CMS1
Other DBs
NCBI-ProteinID: ADV89090
Position
II:1258613..1260142
AA seq 509 aa
MGFTSLGLSAPILKAIQEKGYDTPSPIQLQAIPAILEGKDVMAAAQTGTGKTAGFTLPIL
ERLAKGPRVRANHIRALILTPTRELAAQVQENVFMYSRHLDLNSAVVFGGVKINPQMLRL
RKGADVLVATPGRLMDLYSQNAVKFDQLEVLILDEADRMLDMGFIRDIRKILALLPAKRQ
NLLFSATFSDEIRELAKGLVNNPIEISVNPANSTARTVEQCIYPADVKKKPAMLAKLIND
GDWRQVLVFTRTKHGANRLAAFLTDQGLTAAAIHGNKSQGARTKALADFKSGEVRVLVAT
DIAARGIDIPQLPQVVNFELPKVAEDYVHRIGRTGRAGETGKAISLVCALEAPELFAIER
LIQELLPRKALEGYAPTNAVPESKLDTRPIKPKKPKKPKKPKAPNAEAAGSDASSKGNQK
AKTADKPQGQNRGNGKAKRQFSAPKEGNNDSANKGKRPNTKGSKPANNANGKTNGKPSHA
KPNSAKTGNSKPANGKPSAQRRKPRPQSA
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgggttttacctccttaggtctgtctgcaccaatccttaaagctattcaggaaaaaggc
tatgacaccccttctcccatccaattgcaggccattcctgctattttagaaggcaaagat
gtcatggcggcggcacagacaggaacaggtaaaactgcgggcttcacgctgcctattctt
gaacgtctggcaaaagggccacgtgtgcgcgcaaaccacattcgtgcgcttatcttaacg
ccgacccgcgaattagccgcgcaagtacaagaaaacgtctttatgtacagccgccacttg
gatttaaacagtgcggtggtgtttggtggtgtgaaaatcaacccacaaatgctgcgcctg
cgtaaaggtgctgatgtgttggtggcaacaccaggccgcttgatggacttgtacagccaa
aatgcagtgaagtttgatcagctcgaagtgctcatactggacgaagccgaccgcatgttg
gatatgggtttcattcgtgatatccgcaaaattctggctttgttgcctgcaaaacgccaa
aacctgctgttctcagccacgttttctgacgaaattcgcgaactggcaaaaggcttggtg
aacaaccctatcgagatttcagttaacccagccaactcgacggctcgcaccgtagagcag
tgcatctacccagcagacgtaaagaaaaagccagcgatgcttgccaagctgattaatgac
ggtgattggcgacaagtactggtgtttactcgtaccaagcatggcgcaaaccgtctagcg
gctttccttaccgatcaaggcctgactgccgccgctatccacggcaacaagagccaaggt
gcacgtaccaaagcgttggcggattttaaatcaggcgaggttcgcgtattggtagcaacc
gacatcgccgcacgcggtatcgacattcctcagcttcctcaagtcgtgaactttgagctt
ccaaaagtggcggaagattacgtacaccgcattggccgtactggccgcgccggtgaaacg
ggtaaggcaatttctctagtatgtgcgctcgaagcgcctgaattgtttgccattgagcgt
ttaattcaagaactactacctcgtaaagctctggaaggttacgcaccaaccaacgcagta
ccagagtctaaactggatacgcgcccaattaagccgaaaaaaccgaagaagccaaagaaa
ccgaaagcacctaatgcggaagcagcaggcagtgatgcgagcagcaaaggcaaccaaaag
gcaaaaactgcggacaaacctcaagggcaaaaccgtggcaatggcaaagccaaacgtcag
ttctctgcgccaaaagaaggtaacaatgattcagccaacaaaggtaagagaccaaataca
aagggctcgaaacctgcgaacaacgcgaatggcaaaacaaacggcaagccaagtcacgcc
aaaccaaacagcgcgaaaactggtaacagcaagcctgccaatggcaagccttcggctcaa
cgtcgtaagccacgtccacaaagcgcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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