KEGG   Vulpes vulpes (red fox): 112911072
Entry
112911072         CDS       T05911                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
vvp  Vulpes vulpes (red fox)
Pathway
vvp03040  Spliceosome
vvp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112911072 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112911072 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvp03041]
    112911072 (PRPF19)
   04121 Ubiquitin system [BR:vvp04121]
    112911072 (PRPF19)
   03400 DNA repair and recombination proteins [BR:vvp03400]
    112911072 (PRPF19)
Enzymes [BR:vvp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112911072 (PRPF19)
Spliceosome [BR:vvp03041]
 Complex B
  Other components
   Prp19 complex
    112911072 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    112911072 (PRPF19)
Ubiquitin system [BR:vvp04121]
 Ubiquitin ligases (E3)
  U-box type E3
   112911072 (PRPF19)
DNA repair and recombination proteins [BR:vvp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    112911072 (PRPF19)
SSDB
Motif
Pfam: WD40 Prp19 ANAPC4_WD40 NBCH_WD40 U-box PROPPIN eIF2A Cytochrom_D1 RMC1_N zf-Nse Nup160 DUF1830 ATG16 Cep57_MT_bd
Other DBs
NCBI-GeneID: 112911072
NCBI-ProteinID: XP_025843221
UniProt: A0A3Q7RLQ6
Position
Unknown
AA seq 504 aa
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVAGAGEPMDLGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPADTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtccctgatctgctcgatctccaatgaagtgccagaacacccatgtgtgtcccctgtc
tctaatcatgtgtatgagcggcggctcattgagaagtatattgcagagaatggcacagac
cccatcaacaaccagcctctgtctgaggagcagctcatcgatatcaaagttgctcaccca
atccggcccaagcctccctctgcaaccagcatcccagccattctgaaagccttgcaggat
gagtgggatgcagtcatgctgcacagcttcactctgcgccagcagctccagacaacccgt
caagagctgtcccacgctctgtaccagcatgatgctgcctgccgtgttattgcccggctc
actaaggaagttacagccgcccgagaagctctggccaccctgaaaccacaggctggactc
atcgtgccccaggctgtgccgagctcacagccaagtgttgcaggtgcaggtgagccgatg
gatttgggtgagctggtgggaatgacccccgagattatccagaagcttcaagacaaggcc
actgtgctcaccacggagcgtaagaagagagggaagacggtacccgaagagctggtgaag
ccagaggagctaagcaaataccggcaggtggcatcccacgtgggcttgcacagtgccagc
attcctgggatcctcgccctggacctctgccctgctgacaccaacaagatccttactggt
ggggccgataaaaatgttgttgtcttcgacaagagttccgagcaaatcctggccaccctt
aaaggccataccaagaaagtcaccagtgtggtgtttcacccttcccaggagctggtgttt
tctgcctctccagatgctactatcaggatttggtcagtcccgaatgcgtcttgtgtgcag
gtggttcgggcccatgagagtgctgtgacaggcctcagcctccatgccactggggactat
ctcctgagctcctctgatgaccagtactgggccttctctgacatccagacagggcgtgtg
ctcacgaaggtgacagatgagacctctggctgttctctaacctgtgcgcagttccatcct
gatggactcatttttggaacaggcaccatggactcacagatcaagatctgggacttgaag
gagcgcaccaatgtggccaacttccccggccactcgggccccatcaccagcattgccttc
tcagagaatggctactacttggctacggcggctgatgactcctctgtcaagctctgggat
ctgcgcaagcttaaaaacttcaagacgctgcagctggataacaactttgaggtgaagtca
ctgatctttgaccagagcggcacctacctggcccttgggggcacggatgtccagatctac
atctgcaagcagtggacagagattcttcatttcacagagcatagtggcctgaccacaggg
gtggcctttgggcaccacgccaagttcatcgcttcaacgggcatggacaggagcctcaag
ttctacagcctgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (29)   

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