KEGG   Vulpes vulpes (red fox): 112922703
Entry
112922703         CDS       T05911                                 
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
vvp  Vulpes vulpes (red fox)
Pathway
vvp03008  Ribosome biogenesis in eukaryotes
vvp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112922703 (XRN2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112922703 (XRN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvp03021]
    112922703 (XRN2)
   03019 Messenger RNA biogenesis [BR:vvp03019]
    112922703 (XRN2)
   03009 Ribosome biogenesis [BR:vvp03009]
    112922703 (XRN2)
   03016 Transfer RNA biogenesis [BR:vvp03016]
    112922703 (XRN2)
Transcription machinery [BR:vvp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     112922703 (XRN2)
Messenger RNA biogenesis [BR:vvp03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     112922703 (XRN2)
Ribosome biogenesis [BR:vvp03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    112922703 (XRN2)
Transfer RNA biogenesis [BR:vvp03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    112922703 (XRN2)
SSDB
Motif
Pfam: XRN_M XRN_N
Other DBs
NCBI-GeneID: 112922703
NCBI-ProteinID: XP_025858112
UniProt: A0A3Q7TAI1
Position
Unknown
AA seq 950 aa
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFSPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSVSPNTSF
TSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETKRNSLGGDVLFVGKHHPLHDFILELYQTGSTEPVDVPPELCHGIQG
KFSLDEEAVLPDQIVCSPVPMLRDLTQNAAISINFKDPQFAEDYIFKAVMLPGARKPTPV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGAGIYGNAAPPPAT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgggagtccccgctttctttcggtggctcagccgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattcctgttgatgccagtaaa
ccaaatccaaatgatgtggagtttgataatctatatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaggatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagacgacttctctacatg
gcaatagatggagtggcaccacgtgccaaaatgaatcagcagcgttccaggaggttcaga
gcatcaaaagaaggaatggaagcagcagtggagaagcagcgagtcagggaagaaatactg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgatagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaacttgacagttattttatctgatgctagtgct
cctggtgaaggagaacataaaatcatggattatattagaaggcaaagagcccagcctaac
catgacccaaacactcatcattgcttatgtggagcagatgctgatctcattatgctcggc
cttgctacacatgaacccaactttaccatcattagagaagaattcaaaccaaacaaaccc
aaaccatgtggtctttgtaatcaatttggacatgaggtcaaggactgtgaaggtttgcca
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccctgtgcagaaggagaa
tttatcttccttcgtcttaatgttcttcgggagtatttggaaagagagctcactatggcc
agtctaccgttcacgttcgatgttgagaggagtattgatgactgggtcttcatgtgcttc
tttgtgggaaatgacttccttcctcacctgccatcattagaaattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttctctcctggtggaatattaactcct
catgccttgggttcaagaaattctccaggttctcaagtagccagtaatcctagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcagtatctcctaatacaagtttc
acttctgatggctccccgtctccaataggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagccagaagataacgtcaggctatgggaagctggttggaagcagcggtac
tacaagaacaaatttgatgttgatgcagctgatgagaaattccgtcgtaaggttgtacag
tcttatgttgaggggctctgctgggtccttcgatactattaccagggctgtgcttcctgg
aagtggtattacccattccattatgcaccatttgcttcagactttgaaggtattgcagac
atgccatctgattttgagaagggcaccaaaccatttaaaccattggaacaacttatggga
gtttttccagctgcgagtggtaactttctacctccatcatggcggaagctcatgagtgat
cccgattctagtataattgacttctaccctgaagattttgctattgatttgaatgggaag
aaatatgcgtggcaaggtgttgctctgttgccttttgtggatgagcgaaggctgcgagct
gctctagaagaggtgtacccagacctcactccagaagagactaaaagaaacagtcttgga
ggtgatgtcttatttgtggggaaacatcacccacttcacgacttcattttagaactctac
cagacaggttccacagagccagtggatgtaccacctgaactatgtcatgggattcagggg
aagttttcgttggatgaagaagctgttcttccagatcaaatagtatgttctcctgtcccc
atgttacgagatctgacacaaaacgctgcaatcagtattaattttaaggacccacagttt
gctgaagactacatttttaaagctgtaatgcttccaggagcaagaaaaccaacaccagta
ctgaaacctagtgactgggaaaagtccagcaatggacggcagtggaagccccaacttggc
tttaatcgggatcggcggcctgtccacttggatcaggctgcattcaggactttaggccat
gttatgccaagaggctcaggggctggcatttatggcaatgctgcaccaccacctgcaact
tatcaaggaaacttatacaggccgctgttgagaggacaagcccagattccaaaacttatg
tcaaatatgaggccccaggattcctggcggggtcctcctccccttttccagcagcaaagg
tttgacagaggcgttggggctgaacctctgctgccatggaaccggatgctccaaacccag
aatgcagccttccagccaaaccaataccagatgctagctggacctggcgggtatccaccc
agacgtgatgatcgtggagggagacagggatatcccagagaaggaaggaaatacccattg
ccaccaccctcaggaagatacagttggaattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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