KEGG   Vulpes vulpes (red fox): 112929483
Entry
112929483         CDS       T05911                                 
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
  KO
K12815  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:3.6.4.13]
Organism
vvp  Vulpes vulpes (red fox)
Pathway
vvp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112929483 (DHX38)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvp03041]
    112929483 (DHX38)
Spliceosome [BR:vvp03041]
 Complex C
  Other components
   Step II factors
    112929483 (DHX38)
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 AAA_19 T2SSE nSTAND3 PhoH AAA_30 Flavi_DEAD Microtub_bd AAA_16 AAA_7
Other DBs
NCBI-GeneID: 112929483
NCBI-ProteinID: XP_025867387
UniProt: A0A3Q7U1Y1
Position
Unknown
AA seq 1226 aa
MEDTSEDASIHRLEGTDLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDEGEDKKKSRISSYKDWEESKDDQRDAEEEGSDQAGRHSRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDSDRKRERDERDRSRHSS
RSERDGGSERSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGFSRRSQWESPSPTPSYRD
SDRSHRQSSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDRKHLGSTPRLSRGRGRREDGE
EGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQK
RISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRI
VFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGV
KKEEEPDKALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQEL
LTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEM
GGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAVIMDEAHERSLNT
DVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQE
DYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQ
LPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQ
IYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSL
GVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIV
SCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNN
NYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQA
AKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWL
AELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRS
TKIYTPGRKEQGEPMTPRRTPARFGL
NT seq 3681 nt   +upstreamnt  +downstreamnt
atggaggacaccagcgaggatgcctcaatccatcgattagaaggcactgatctggactct
caggttggcggtcttatttgcaagaccaaaagtgcagccagtgagcagcatgtcttcaag
gctcctgccccccgcccttcattgctgggactggacttgttagcttccctgaaacgaagg
gagcgagaggagaaggatgaaggggaggacaagaagaagtccagaatttcttcctacaag
gactgggaagagagcaaggatgaccagagagatgctgaggaggagggtagtgaccaagct
ggccgacatagccgaaaagacagacattatcgatctgctcgggtagagactccatcccat
cctggtggtgtgagtgaagagttttgggaacgcagtcggcagagagagagggagcggcgg
gaacatggtgtctatgcctcgtccaaagaagaaaaggatcggaagaaagagagatcacgg
gatcgagactctgaccgcaagagagagagagatgagagggacagaagcagacacagcagc
agatcagagcgggatggagggtcagagcgcagcagaagaaatgaaccggagagcccgaga
caccgacctaaagatgcagctaccccttcaaggtctacgtgggaggaagaggacagtggc
tatggcttctcaagacgctcgcagtgggaatcaccctcaccaactccttcctatcgggat
tctgaccggagccatcgacagtccagtcgagatcgggataggtctgtgaggagcaggtac
tcagatgatacacctctgccaaccccatcctacaaatacaatgagtgggccgatgacaga
aaacacctggggtccacgccccgtctgtctaggggccgaggaagacgtgaggatggcgaa
gaaggaatttcatttgacacagaagaggaacggcaacaatgggaggatgatcaaaggcaa
gccgaccgggactggtacatgatggatgagggatacgatgaattccacaatcccctggcc
tactcctccgaggattatgtgagaaggcgggagcagcacctgcataaacagaagcaaaaa
cgcatttcggctcagcggaggcagatcaacgaggataatgagcgctgggaaaccaaccgc
atgctcaccagcggcgtggtccatcggctcgaggtggacgaggactttgaggaggacagc
gcagccaaggtgcatctgatggtgcataacctggttcctccctttctggatgggcgtatc
gtcttcaccaagcagccagagcctgtgattccagtcaaggatgccacttctgacctggcc
attattgctcgaaaaggcagccaaaccgtgcggaagcacagggagcagaaggaacgcaaa
aaggctcaacacaagcactgggagctggctggaaccaaactgggagatataatgggtgtc
aagaaagaggaagagccagataaagccctgacagaagacggtaaagtggactataggaca
gagcagaagtttgcagatcacatgaagaaaaagagtgaagccagcagcgaatttgccaaa
aagaagtcaattctggagcagagacagtacctgcccatctttgctgtgcagcaagaacta
ctcactattatcagagataacagcattgtgatcgtagttggagagacaggaagtgggaag
accactcagctgacgcagtacttgcatgaagatggttacacggactatgggatgatcggg
tgcacccagcctcggcgtgtggctgccatgtctgtggccaagagagtcagtgaagagatg
ggtggaaaccttggtgaggaggttggttatgcgatccgcttcgaagactgcacttcagaa
aacaccttgatcaaatacatgactgatgggatcttgctcagggagtccctccgggaagca
gacctggatcactacagcgccgtcatcatggatgaggcccacgagcgctccctcaacact
gatgtgctctttgggctgctccgggaggtggtggctcggcgctcagacctgaagctcatt
gtcacgtcagccactatggatgcagagaaatttgctgccttttttgggaatgttcccatc
ttccacatccctggtcgtaccttccctgtggacattctcttcagcaagactccgcaggag
gattacgtggaggccgcagtgaagcagtccttacaggtgcacctttcaggggcccccggg
gacatccttatcttcatgcctggccaagaggacattgaggtaacctcagaccagattgtg
gaacacctggaggaactggagaatgcacctgccttggctgtgctgcccatctactcccag
ctgccatctgacctccaggctaaaatcttccagaaggctccagatggcgttcggaagtgt
atcgttgccaccaacattgctgagacatctctgactgttgacggcatcatgtttgttatt
gactctggatattgcaaattaaaggtcttcaaccccaggattggcatggatgctctacag
atctaccccatcagccaggccaatgccaaccagaggtcggggcgagccggcaggacgggc
ccaggtcagtgtttcaggctctacacccagagtgcctacaagaacgagctcctgactacc
acagtgcctgagatccagaggaccaacctggccaatgtggtgctgctgctcaagtccctg
ggcgtgcaggacctgctgcagttccacttcatggacccgccccctgaggataacatgctc
aactccatgtatcagctctggatcctcggggccctggacaacacaggtggtctgacctcg
actgggcggcttatggtggagttcccgctggacccagccctgtccaagatgctcatcgtg
tcctgtgacatgggctgcagctctgagatcctgctcattgtttccatgctgtccgtgcca
gccatcttctacaggcccaagggccgagaagaggaaagtgatcaaatccgggagaagttt
gctgtccctgagagtgatcatttgacctacctgaacgtctacctgcagtggaaaaataat
aattactccaccatctggtgtaacgatcatttcatccatgccaaggccatgcggaaggtc
cgggaagtgcgagctcagctcaaggatatcatggtgcagcagcggatgagcctggcctcg
tgcggcacggactgggacatcgtcaggaagtgtatctgtgctgcctatttccaccaggca
gccaagctcaagggaattggggaatatgtgaatatccggacagggatgccctgccacttg
caccccaccagctcactctttggaatgggctacaccccagactacatagtatatcatgag
ctggtcatgaccaccaaggagtacatgcagtgtgtgaccgcagtggatggagagtggcta
gcagagctgggccccatgttctacagtgtaaaacaggcaggaaagtctcgccaggagaac
cgccgacgggccaaagaggaagcttctgccatggaggaggagatggcacttgctgaagag
cagctgcgagcccgacggcaggagcaggaaaagcgcagccctctgggcagtgtcaggtct
acaaagatctacactcctggccggaaggagcaaggggaacccatgacgcctcgccgcaca
ccagcccgctttgggctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (15)   
   Pfam (15)   
All databases (30)   

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