KEGG   Vulpes vulpes (red fox): 112931604
Entry
112931604         CDS       T05911                                 
Symbol
PABPC4L
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
  KO
K13126  polyadenylate-binding protein
Organism
vvp  Vulpes vulpes (red fox)
Pathway
vvp03015  mRNA surveillance pathway
vvp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112931604 (PABPC4L)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112931604 (PABPC4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvp03019]
    112931604 (PABPC4L)
   03041 Spliceosome [BR:vvp03041]
    112931604 (PABPC4L)
Messenger RNA biogenesis [BR:vvp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     112931604 (PABPC4L)
   mRNA cycle factors
    Stress granule specific factors
     112931604 (PABPC4L)
Spliceosome [BR:vvp03041]
 Complex C
  Other components
   Complex C specific factors
    112931604 (PABPC4L)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7 MARF1_RRM1 RRM_occluded Nup35_RRM
Other DBs
NCBI-GeneID: 112931604
NCBI-ProteinID: XP_025870080
UniProt: A0A3Q7US64
Position
Unknown
AA seq 377 aa
MNVAAKYRQASLYVGDLDAEVTEDALFRKFSAAGPVLSIRVCRDLLTRRSLGYAYVNFLR
LADAQRALDTMNFDVLRGRPLRLMWAQRDAHLRRSGVGNVFIKNLDRSVDDKALFERFSA
FGKILSSKVVRDERGPRGYAFVHFQEPSAAERAIEHMNGAQLRGCRLFVGRFQSRQARQA
ELQLRARAGDFTNLYIKNFGGRMDDARLRAVFSEYGKTLSVKVMTDAGGRSRGFGFVSFE
SPEAARRAVEALNGRRLDGQPLFVGRAQRXXXXXXXXXXXXXXXXXXXXXXXXXRGAQGA
GLYVKNLDDAVDEDGLRREFARFGAVSRVKIMREEGRSRGFGLVCFAAAEEAARALAEMN
GRVLGSKPLSIALAQRP
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaacgtggccgccaagtaccgccaggcgtccctgtacgtgggggacctggacgccgag
gtcaccgaggacgcgctgttcaggaagttcagcgccgcggggcccgtgctgtccatccgc
gtgtgccgggacctgctgacccgccgctcgctgggctacgcctacgtgaacttcctgcgg
ctcgcggacgcgcagcgcgccctggacaccatgaacttcgacgtgctgcggggccggccg
ctgcggctcatgtgggcccagcgcgacgcgcacctgcgcaggtcgggggtggggaacgtg
ttcatcaagaacctggaccgctcggtggacgacaaggccctcttcgagcgcttctcggcc
ttcggcaagatcctgtcgtccaaggtggtgcgcgacgagcgcgggccgcggggctacgcg
ttcgtgcacttccaggagccgagcgcggccgagcgcgccatcgagcacatgaacggggcg
cagctgcgcggctgcaggctcttcgtcggccgcttccagagccgccaggcccgccaggcc
gagctgcagctgcgcgcccgcgccggcgacttcaccaacctgtacatcaagaacttcggc
ggccgcatggacgacgccaggctcagggccgtgttcagcgagtacggcaagaccctgagc
gtcaaggtgatgacggacgcgggcggcaggtcccgcggcttcggcttcgtgagcttcgag
agccccgaggcggcccggcgggcggtggaggccctgaacggccgcaggctggacgggcag
ccgctgttcgtgggccgcgcgcagcgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncccgcggggcgcagggcgcc
gggctctacgtcaagaacctggacgacgccgtggacgaggacgggctgcgcagggagttt
gcccgcttcggggccgtcagcagggtcaagatcatgcgggaggaagggcggagcaggggc
ttcggcctcgtctgcttcgccgccgccgaggaggccgccagggccttggccgagatgaac
ggccgcgtgctgggctccaagccgctgtccatcgccctggcccagaggccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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