KEGG   Vibrio vulnificus CMCP6: VV2_0080
Entry
VV2_0080          CDS       T00108                                 
Name
(GenBank) Exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
vvu  Vibrio vulnificus CMCP6
Brite
KEGG Orthology (KO) [BR:vvu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvu03400]
    VV2_0080
DNA repair and recombination proteins [BR:vvu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VV2_0080
    Archaeal homologous recombinant proteins
     VV2_0080
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 AAA_21 DUF3867 AAA_16 AAA_5 ABC_tran
Other DBs
NCBI-ProteinID: AAO07056
UniProt: A0A3Q0KX62
Position
II:81686..84751
AA seq 1021 aa
MKPLKLTMQAFGPFAEREVIDFTQLGENPLFLINGPTGSGKTSILDAISFALYGETTGNE
RQGMQMRSDLASIHLATEVTLEFLLHGKRYKVIRLPEQEAAKARGEGTTTKKHTAALYLC
QDDEELITSKTAEVKTRVTELIGLNETQFRQVMVLPQGKFRDLLLASSKDREEIFGQLFQ
TEIYKRIEWALKDKANAISKAKEEFDNQIRGALEVADVSDEQALKEALADKKTQLMQWQE
TEKHALERYNSAKQSLSTAKALVEDFNKLALAKTNLDAHLAKNDQMFHLAQKLEQARQAQ
QLDAPYRQWKNALNDVHAQQGKIDELNASLNILLLQSNELEQQCLQAQKNAEQIPQLQQR
TYELETVKSKLVEKAQFEQEIIRLEEEVQKFAHQLKRVQEHKVVMQQELTSAIEAFEKAK
QQAAEIPRLEARESELKRQISDYEQYQNLNTALQNLLTQTEQKEQLHQQAKQHWLNAQQS
ADSIELSWHNGQAAILAQRLHQGEACPVCGSLEHPQKAQFVGEPVHKQQVEQAREQEKTA
LAQLNQHHQELELHLAQVKQQQKAIEEKATQLGELLNSPLETLQAQALEIHHTLKQLQGL
DLAQQESHVKQLTERCAKGEEMEKELAQQHISSRATLKEKTQQLAKFSQQIAAQFSHVAQ
VELEIAQLKQQTTALQTAKETSQKRFDEIQQTLAARQSEVKAHGEMLLQTQQRSEQNQTA
WLEALSASSFDDEPHYLALRVEPEQIEQWKREIEQHQQQATRLEQSYHDLKERLKDQQAP
ELEQLELLVTTTEQQYQQNKNELDAVRSLVAKLETVQAKIAELHTHNHRLEEEYKVFGTL
YDVASGKTGSRISLHRFVLGVLLDDVLIQASHRLALMSKGRYQLTRKTEGFKGTAGRGLD
LIVEDSYTGKSRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLETLFIDEGFGSLDP
ESLDLAIQTLVELQQTGRMIGVISHVSELKEQMQQRIDVIPSRVGSSIRLKSAFAANAST
S
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgaaaccactcaaacttaccatgcaggcgtttggtccatttgctgaacgtgaagttatt
gattttacccaactgggtgaaaacccactgtttctaattaatgggcccacaggttcggga
aaaacctctatcttggatgcgatcagtttcgccctttatggcgaaaccacaggcaatgag
cgccaaggtatgcagatgcgttcagatttggcctctatccatctagccacggaagtgacg
ttagagtttctgctacacggaaaacgctataaggtgattcgcctgcctgagcaagaggcg
gcaaaagcgcgcggtgaaggcaccaccaccaaaaaacacactgccgcgctttatctttgc
caagatgacgaagagctgatcaccagcaaaacggctgaagtgaaaacgcgagtgacggaa
ttgattggcttgaacgaaacgcagtttcgccaagtcatggtgttgccacagggaaaattc
cgcgatttgctgctggcgagttccaaagatcgtgaagagatttttggccaactgttccaa
accgaaatttacaaacgcattgaatgggcgctaaaagacaaagccaatgcgattagtaaa
gccaaagaagagtttgataaccaaattcgtggggcgctagaggtggcggatgtcagtgat
gagcaggcgctcaaagaggcgcttgcagacaaaaaaacgcaactgatgcagtggcaagag
acagagaaacacgctctcgagcgttacaattcggccaagcaatccctttccacggctaag
gctctggtggaggattttaataaactggctttggccaaaacgaatttagatgcccatttg
gcgaaaaatgatcagatgtttcacttggcgcaaaagctggaacaagcacgacaagctcag
cagcttgacgcaccgtatcgccagtggaaaaacgcactcaatgatgttcatgctcagcaa
ggcaaaattgacgagcttaacgcatcattaaacatactgttgttgcagagcaatgagctg
gaacaacagtgtttgcaggcgcagaaaaatgccgaacaaattcctcagctacaacagcga
acgtatgaattagagacggttaaaagcaagctggtggaaaaagcccagtttgaacaagag
atcattcgtcttgaagaagaagtacagaaatttgctcatcaattaaaacgcgtgcaagaa
cataaagtcgtgatgcagcaggaactgacgtccgccattgaagcgtttgaaaaggcaaag
cagcaagcggcagagataccgagacttgaagcgcgagagagtgagcttaagcgtcagatc
agtgactatgaacaataccagaatctgaatacagcgctgcagaatttactcacacaaact
gaacaaaaagagcagttacatcagcaagccaagcagcattggctcaacgcccaacagtct
gcggatagcatagaactgagttggcataatggccaagccgctattttggctcagcgcctt
catcaaggggaagcttgcccagtttgtggtagcctcgaacacccgcaaaaagcgcagttt
gtcggtgagcctgtgcataaacagcaagtagaacaggcccgtgagcaagaaaaaaccgct
ctcgcacagctcaatcaacatcaccaagagctggagctgcaccttgcacaagttaagcaa
cagcagaaagcgattgaggaaaaagcaacacaactcggtgagctgcttaacagcccgtta
gaaaccttgcaggcgcaagctcttgaaatccatcacacactcaaacagctgcaagggttg
gatctcgctcagcaagaaagtcatgttaaacaactgaccgagcgttgtgcgaagggcgag
gagatggaaaaagaactcgctcagcaacatatttctagcagagcaacgttgaaagaaaaa
acgcaacagttggcgaagttcagccaacaaattgccgcacaatttagccatgtagcccaa
gttgagctggaaattgcgcagctcaagcaacaaacgacggctttacaaacggcaaaagag
acgagccaaaagcgttttgatgagattcaacaaacgcttgccgcgcgtcaaagtgaagtt
aaggcacacggtgagatgttgctgcagactcagcagcgcagtgaacaaaaccaaactgca
tggttggaggcgttgtctgcatcgtcatttgacgatgaaccgcactatttggcgttgcgt
gtcgagccagaacagatcgaacaatggaaacgtgagattgagcaacatcaacagcaggcg
acacgtttagagcagagttatcacgaccttaaagagcgtttgaaagatcagcaagcaccc
gagcttgagcaattagagctgttggtgacaacgacagaacagcagtatcaacagaacaaa
aatgagttggatgcggtgcgttcactggtggcgaagcttgagaccgtgcaagcgaagatt
gctgaactgcacacgcataatcatcgccttgaagaagagtacaaggtttttggcacactc
tacgatgtggcaagcggcaaaacaggcagtcgcattagcttgcaccgttttgtgttaggg
gtgttgctggatgatgtactgattcaagcttcgcatcgtttggcattaatgagcaaaggt
cgctaccagttaacgcgaaaaaccgaagggtttaagggcacggcgggtcgcgggctcgat
ctgattgtggaagacagctacaccggaaaatcgcgtgatgtcgccacactctcaggtggt
gaatcgttcatggccgcactttccctagcactgggtttatcggatgttgttcagtcatac
agtggtggcattcgtttagagactttgtttattgatgaaggctttggtagcttggatcct
gaatcccttgatcttgcgattcaaaccttggtggagttgcagcaaacaggccggatgatc
ggggtgatttcccatgtgtcagagttgaaagaacaaatgcaacaacggattgacgtgata
ccgtcgcgagtgggctcttcgattcgccttaagtccgcttttgccgctaatgcctcaaca
agttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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