KEGG   Vibrio vulnificus YJ016: VV1234
Entry
VV1234            CDS       T00150                                 
Name
(GenBank) nuclease subunit of the excinuclease complex
  KO
K03703  excinuclease ABC subunit C
Organism
vvy  Vibrio vulnificus YJ016
Pathway
vvy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vvy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VV1234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvy03400]
    VV1234
DNA repair and recombination proteins [BR:vvy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VV1234
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 UVR HHH HHH_2 HHH_3 GIY_YIG_domain DUF1569 GIY_YIG_2
Other DBs
NCBI-ProteinID: BAC93998
UniProt: Q7MM39
Position
I:1247094..1248926
AA seq 610 aa
MTQIFDSVSFLKTVTHQPGVYRMYNAEAVVIYVGKAKDLKKRLSSYFRKKVDSEKTKALV
SNIAKIDVTVTHTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAHRHPRVSLHRG
AKKRKGEYFGPYPDSGAVRETLHLIQKIFPVRQCEDTVYANRTRPCLMYQIGRCAGPCVS
SVISDVDYAELVGYLRLFLQGKDNQVLELLVQKMEIASQQLKFEDAAKFRDQIQAIRRVQ
EQQYVSEDSQEDMDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPQNTNAQEVFDSF
LTQYYLSHNEARTIPSRIILNQELAADVEAIQLALSDVAGRKVQFHTSPSGSRGRYLKLS
NTNALTAMTTKINHKMTINQRFKALRDVLAMDSIARMECFDISHTMGESTIASCVVFNSE
GPVKQEYRRYNITGITGGDDYAAMGQALERRYAKQLDVEKIPDVIFIDGGKGQLNRAHEI
IAQYWGDWPKRPVMIGIAKGVTRKPGLETLITVDGDEFHLPSDDPALHLIQHIRDESHNH
AIAGHRAKRGKTRKTSALEGIEGVGPKRRQALLKYTGGLQELKRASVEEIAKVPGISHSL
AEIIYQALKQ
NT seq 1833 nt   +upstreamnt  +downstreamnt
gtgactcaaatttttgattcggtatctttcctcaagacagtaactcatcagcctggcgtt
tatcgtatgtataacgccgaggctgttgttatttatgtcggtaaagccaaagatctcaaa
aaacgcctctcaagctatttccgcaaaaaagttgacagcgaaaaaaccaaagcattggtg
agtaatattgccaaaattgatgtgaccgtgacgcacaccgaaacggaagcgctgattctt
gagcataattacattaagcaatatttgccgaagtataatgtcctgctgcgagacgataag
tcttatccctatattttccttagtgcccatcgccatcctagggtctctctgcatcgtggt
gctaagaagagaaaaggcgagtatttcggaccttatccggactcaggtgcagtacgtgaa
accttgcacttgatccagaaaattttcccggtgagacagtgtgaagacaccgtttatgct
aaccgaacgcgtccttgtttgatgtaccagattggtcgctgtgcgggcccttgtgtcagc
agtgtcatttctgatgtcgattatgcagagctggtgggttacttacgtctatttttacaa
ggtaaagataaccaagttctagagctcctagtgcaaaaaatggagattgcgagccagcaa
cttaagtttgaggatgcggcaaaatttcgtgatcagatccaagcgattcgtcgcgttcag
gaacaacaatatgtttcggaagatagccaagaagatatggatgtgctcggttttgcacaa
gaaaatggcattgcatgcatccatatcttgatgattcgccaaggtaaggtactgggaagt
cgcagtcattttcccaagattcctcaaaacaccaatgcgcaagaagtgtttgacagcttt
ttgacgcaatactatttgagccacaacgaagctcggacgattccatcgcgcatcattctc
aatcaggaactggctgcggatgtcgaggcgattcagctggcgctcagtgatgtcgctggg
cggaaagtacaatttcatacctcgccatcagggtcacgtggtcgttacctcaaattgtcc
aataccaatgctctgacggcaatgacgaccaaaatcaatcataagatgacgattaatcaa
cgctttaaggcgttacgtgacgttcttgcgatggactcgattgctcgcatggagtgtttc
gatatttctcataccatgggcgaaagcacgattgcctcatgcgtggtgttcaacagtgaa
ggtccggtaaagcaagagtatcgtcgttacaacattaccggaatcactggtggtgacgac
tatgcagccatggggcaagctttagagcgtcgttacgccaaacaactggatgtcgagaaa
attccagacgttatttttattgatggtggtaaagggcaactcaatcgagcgcacgaaatc
atcgcgcaatactggggagattggccgaagcggcccgtgatgatcggaatcgcaaaagga
gtcactcgtaaaccaggtttggaaactttgattacggttgatggcgatgagtttcatcta
ccaagtgatgatccggctctacatttaatccagcacatccgtgatgagagccataatcat
gccatcgcagggcacagagcgaagcgcggaaaaacgcgtaaaacgagtgcgttagagggc
attgaaggcgtaggacccaaacgccgtcaagcgctgttgaaatacacggggggcttacaa
gagctcaagcgtgcaagtgttgaagaaatcgccaaagtgccgggcatcagtcactctttg
gcagaaattatctatcaagcattgaaacaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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