KEGG   Vibrio vulnificus YJ016: VV3106
Entry
VV3106            CDS       T00150                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
vvy  Vibrio vulnificus YJ016
Pathway
vvy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VV3106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvy03019]
    VV3106
   03110 Chaperones and folding catalysts [BR:vvy03110]
    VV3106
   03029 Mitochondrial biogenesis [BR:vvy03029]
    VV3106
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvy04147]
    VV3106
Enzymes [BR:vvy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     VV3106
Messenger RNA biogenesis [BR:vvy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VV3106
Chaperones and folding catalysts [BR:vvy03110]
 Heat shock proteins
  HSP60 / Chaperonin
   VV3106
Mitochondrial biogenesis [BR:vvy03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    VV3106
Exosome [BR:vvy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VV3106
  Exosomal proteins of other body fluids (saliva and urine)
   VV3106
  Exosomal proteins of breast cancer cells
   VV3106
  Exosomal proteins of colorectal cancer cells
   VV3106
  Exosomal proteins of bladder cancer cells
   VV3106
SSDB
Motif
Pfam: Cpn60_TCP1 REF
Other DBs
NCBI-ProteinID: BAC95870
UniProt: Q7M7I7
Position
I:complement(3186809..3188449)
AA seq 546 aa
MAAKDVKFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKQVASQANDVAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSKDCSTSTEIEQVGTISANSDSSVGKIIAEAMEKVGRDGVITVEEG
QALHDELDVVEGMQFDRGYLSPYFINNQESGSVELESPFILLVDKKISNIRELLPALEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLELEKATLEDLGQAKRVSITKENTTIIDGVGEEAMIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVAGGGVALI
RAASKIVDLQGDNEEQNVGIRVALRAMEAPLRQITKNAGDEESVVANNVRAGEGSYGYNA
ATGVYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDSGMPDMGGMGGM
GGMGMM
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggctgctaaagacgttaaatttggtaatgacgctcgcgtaaaaatgctagaaggtgtc
aacattctagctgacgcagtaaaagtaacactgggccctaaaggccgtaacgtggtactc
gacaaatctttcggtgcaccaacgattacaaaagatggtgtatcggtcgcgcgtgaaatt
gaacttgaagacaagttccaaaacatgggcgcacaaatggtgaagcaagtggcttcacaa
gcaaacgacgtcgcgggtgacggtacgacaacggcgacggtacttgcgcaagctatcgta
aatgaaggtcttaaagcggttgctgcgggtatgaacccaatggaccttaagcgtggtatc
gacaaagctgtggcggctgcagttgaagaactgaaagcgctatccaaagattgctcaacc
agcactgaaatcgagcaagtaggcaccatctctgcgaactccgattcaagcgtgggtaaa
atcattgcggaagcaatggaaaaagtgggccgtgacggtgttatcacggtagaagaaggt
caagcactgcacgatgagctagacgttgttgaaggtatgcagtttgaccgtggttaccta
tcaccatacttcatcaacaatcaagagtctggcagcgttgaactagagagcccattcatc
ctattggttgataagaagatctctaacattcgcgaacttctaccagcacttgaagcggta
gcaaaagcctctcgtccactgctgatcatcgcagaagatgtggaaggtgaagcgctcgct
acactggttgtgaacaacatgcgcggcatcgtgaaagtggcggcggtgaaagcgcctggc
tttggtgatcgtcgtaaagctatgctacaagacattgctatcctaacaggtggtacggtg
atttctgaagaagtgggtcttgagcttgaaaaagcaactctagaagatctaggtcaggcg
aagcgtgtttctatcaccaaagaaaacaccaccatcattgatggcgtgggtgaagaagcg
atgattcaaggccgtgttgctcaaattcgtcagcaaatcgaagatgcaacgtcagattac
gacaaagagaaactgcaagagcgtgtggctaaactggctggcggcgttgccgttatcaaa
gttggcgctgcgactgaagttgagatgaaagagaagaaagaccgcgtagaagatgcacta
cacgcaactcgcgcagcggttgaagaaggtattgttgctggtggtggtgttgccctcatc
cgtgcggcttctaagattgtagacctacaaggcgacaacgaagagcaaaacgtcggtatc
cgtgtagcactgcgtgctatggaagcgccacttcgtcaaattaccaagaatgcgggcgat
gaagagtccgtggttgcgaacaatgttcgcgctggtgaaggttcatacggctacaacgca
gcaacgggtgtatacggcgatatgctagagatgggtatcctagacccaacaaaagtaacg
cgctctgcgctgcagtttgcggcatcggttgctggcctaatgatcaccactgaagcaatg
gtgactgacctaccacagaaagactctggtatgccagatatgggtggtatgggcggtatg
ggtggcatgggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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