KEGG   Waddlia chondrophila: wcw_0679
Entry
wcw_0679          CDS       T01255                                 
Symbol
alr
Name
(GenBank) putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
  KO
K01798  Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
Organism
wch  Waddlia chondrophila
Pathway
wch00300  Lysine biosynthesis
wch00470  D-Amino acid metabolism
wch00550  Peptidoglycan biosynthesis
wch01100  Metabolic pathways
wch01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:wch00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    wcw_0679 (alr)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    wcw_0679 (alr)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    wcw_0679 (alr)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    wcw_0679 (alr)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:wch01011]
    wcw_0679 (alr)
Enzymes [BR:wch01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     wcw_0679 (alr)
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     wcw_0679 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:wch01011]
 Precursor biosynthesis
  Amino acid ligase
   wcw_0679 (alr)
  Racemase
   wcw_0679 (alr)
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: ADI38046
UniProt: D6YV85
Position
complement(737999..740440)
AA seq 813 aa
MDAFDLRNWSGFISAGGDSNRPALIDQIVIDTRRIYASNALFAALKGQRQDGHSFVSGSG
AKFALVEKHWEGPADGPSLLKVDDPLTAFQEIAGSYRSQLRGNVIAVIGSYGKTMVKDLL
RHLLSSSFTVASSPESFNSQVGVPLSLLGAAKAHEQVIIEAGFSHPGEMARLCKIIRPSH
IILTHVGNKHLHTIGSKEQIAQEMCHFSLSSDASWTLLPKDPILSPLPKPYYWDTPQPNL
PHASFHENSKAITVQFPKGDAHTILRPLGMSYILDLINIGLKAAYLLGVPEKQIVDALKT
YQPEPMSTEIWKSQNGATFINETYCEDPQSLDCALRRFDFHSPKGKKTLLFSGIKQNDPA
LDARIGEAIGNSMPDTLMLIEPSFQLEHAVKTIAPQTAIRHFSTVEAALKDHAGSMRPED
ILIVKGKKKLPFDQLTQTVQGSIFSNQCRINLAAIASNIKQIRSRLTPHTEIMAMVKATA
YGTQDALMAKFLKTEGIRRLGVSYIDEGISLRKEGVDQDIFVLNAAPYEIEKAVSWQFEI
AVNDKETIDQIGRMSSERGTITRVHLHINTGMSRLGCRPEEALPLARIIQAHPHLKLEGV
MTHFACSDNPDEDTFTLEQSRIFDHSIEAIEQEGISIPFRHACNSAAALRLHFPQYNIVR
IGMALYGLCPGGTLALSLHSRIVGINHCIKGETISYGRSYTVQREREKIAVIPIGYYDGL
HLNYSSKGKVMIHGAEAPIVGRICMDYMMVDITHIPDACIGDPVLIFGEDAEGNVLSPNE
LAEQGNSSVYELISCLGPRIQRVFIHEENDKIM
NT seq 2442 nt   +upstreamnt  +downstreamnt
atggatgcatttgatctaagaaactggtccggattcatttctgccggaggggactccaac
agaccggctttgattgatcaaattgtcattgacacgagaaggatttacgcctcaaacgcg
ttgtttgcagctttaaaagggcaacgtcaagacggacatagttttgtttccggaagcggc
gctaaattcgctttagtagaaaaacactgggaggggccagcagacggtccctctcttctc
aaagtggacgatccgctcacagcttttcaagagattgccggcagctaccgctctcagctt
agagggaatgtaatcgcagtcatcggatcctacggaaaaacaatggttaaggatctgctg
cgccacctactatcttcctcatttactgttgcttcatctccggaaagcttcaacagccaa
gtcggcgttccgttaagcttgctaggtgcggcaaaggcgcatgagcaggtcatcattgaa
gcaggattttcccatcctggagagatggcaagactatgcaaaatcatccgtccctcccat
atcatcctcacccatgtaggcaacaagcatctgcacacaatcggctccaaagaacagatt
gctcaggaaatgtgtcatttttccctttcctcggatgcatcctggaccttattaccaaaa
gatccgatccttagtcctcttccaaagccctactactgggacacccctcagcctaacctg
cctcatgcttcttttcacgaaaacagcaaagcgatcaccgtgcagtttcctaaaggagat
gcccatacgatcttgcggccgcttgggatgagctatatcctcgatctgatcaatatcgga
ttaaaagcagcttaccttttgggagttcctgagaaacagatcgttgatgctttgaaaact
tatcagcctgagccaatgagcactgaaatttggaagtctcaaaacggcgcgaccttcatc
aacgagacttactgtgaagatccgcaaagcctggactgtgcattgcgccgctttgatttt
cactctccgaaaggaaaaaaaacgcttctatttagcggtatcaaacagaatgatcccgca
cttgatgccagaattggagaggcaatcggaaattccatgcctgatactttgatgttaatc
gaaccttccttccagctagagcatgcagtgaaaacaattgcgcctcaaacagccatccgc
catttttccaccgttgaggcagctttgaaggatcatgccggatcgatgaggcctgaagac
attctgatcgtcaaaggaaaaaagaagctgccgttcgatcaactgacacaaacagtgcaa
ggcagcattttttctaaccagtgccgcattaatctagcggcgattgcatccaatatcaag
cagatccgttcccgcttgactcctcatacggaaatcatggcgatggtcaaagctacagct
tatggaacgcaagacgcccttatggccaaattcttaaaaacagaagggatccgacggctg
ggagtctcttatattgatgaaggaatttctctcaggaaagaaggggtggatcaagacatt
tttgtgttgaacgcagcgccctacgaaattgaaaaagctgtaagctggcagtttgaaatt
gccgttaatgataaggagaccattgatcagattgggcgcatgtcttcagagaggggcacc
atcacgcgcgttcacctgcatattaacactggaatgagcaggttgggttgcagacctgag
gaagcacttccattggccagaatcattcaagcgcaccctcacttaaaactcgaaggtgtc
atgactcatttcgcttgctccgacaatcctgatgaggacactttcactttagagcaatcc
cgcatcttcgaccactccatcgaagcgattgaacaggaaggaatttcgatcccttttcgc
catgcatgcaactcagcagctgctttgaggctccattttcctcaatacaacatagtcaga
atcgggatggctctttatggcctttgtcctggaggaacccttgctctttccttgcattcc
cgtattgtgggcatcaaccactgtattaaaggggagacgatcagctatggccgcagctat
acagtacaaagggaaagagagaagattgccgtgatccccattgggtactatgacgggctt
cacttaaattacagcagcaaaggaaaagtgatgatccatggggcggaagctcccatcgtc
ggcaggatctgcatggactacatgatggttgacatcacacacattccagacgcttgcatc
ggtgatcccgttctcatcttcggcgaagatgccgaagggaacgttttatctcccaatgag
ttagccgagcaggggaactcatccgtctacgaattgatctcctgtctcggcccgcggata
caacgcgtatttattcatgaagagaacgataaaatcatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (5)   
   KEGG ENZYME (2)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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