KEGG T02640: wHa

Wolbachia endosymbiont of Drosophila simulans wHa: wHa_09490

Entry

wHa_09490         CDS       T02640

Symbol

topA

Name

(GenBank) DNA topoisomerase

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

wen Wolbachia endosymbiont of Drosophila simulans wHa

Brite

KEGG Orthology (KO) [BR:wen00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wen03032]
    wHa_09490 (topA)
   03400 DNA repair and recombination proteins [BR:wen03400]
    wHa_09490 (topA)
Enzymes [BR:wen01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     wHa_09490 (topA)
DNA replication proteins [BR:wen03032]
Prokaryotic type
  DNA Topoisomerases
   wHa_09490 (topA)
DNA repair and recombination proteins [BR:wen03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      wHa_09490 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_4 Toprim_2 SPOB_a

Other DBs

NCBI-ProteinID:

AGK00364

UniProt:

M9X0K6

Position

1112238..1114688

AA seq 816 aa
MALLIVESPAKAKTIGKYLSKEFKVAASFGHVRDLPAKNGSVDPDNDFAIKYETIEKAEK
YIKELVKAASKTSDIYLATDPDREGEAMAWHVIETLKEKKAISNENNIYRVVFNEITKRA
VQEAIKNPREINMDLVRAQQARRALDYLVGFSLSPLLWTKLSGSKSAGRVQSVALKIICE
REDEISKFITQEYWSIKAEMQNSKDEAFFAMLSHYDNKKLEKFDIKNEEEAKNLVREIES
RQYAVSTVERKQVKRNPLPPFITSSLQQDAVNKLYFNVKSVMRIAQNLYEGIDIGGETVG
LITYMRTDGFHIADEAINSIRGSIKSLYGDKYLPQSPRKYVKKVKNAQEAHEAIRPTDIN
RTPGSIKDYLTPEQFKLYDLIWKRTIASQMESAIFDQVVVEISSTDQKVILRASGSSIFF
DGFYRVYQDNIEAENEGLLPAMKEGEACKLISVEPKQHFTQPPPRYSEASIVKKMEEIGI
GRPSTYATIISVLQDREYVSLDSKRFIPSSRGKIVTIFLETFFQRCVEYDFTAQMEEKLD
LISNGHADWKKELGHFWVPFFGHVNSVKQMTHDEVFSGIHDLVIDWFCSEEGKKEVNTKC
PACSDGILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNSEYPKSLGIDDITNQEVMIKK
GPFGLYLEFNNELKKKKTVSIPKDINVNEIDLSTATQLLSLPKVIGEHPETGKEVKIGLG
RFGYYIFYDGRYFSLKKSSKEVLNRELSEVVQIIANSPCKELKSLGVNEKGKEVFICNGR
YGFYIKCGKTNVALGKSADIESIDLEKALELIKNKK

NT seq 2451 nt +upstreamnt +downstreamnt
atggcattattaatagttgaatcacctgcgaaagcaaagacaataggtaaatatttgagt
aaagagttcaaagtagctgcatcctttggacatgtgagggatcttccagcaaaaaacggt
tctgtcgatccggataatgattttgctataaagtatgaaaccattgaaaaagcagaaaag
tatataaaagagctagtaaaagccgcaagcaaaacatcagatatatatcttgcaacagac
ccagacagagaaggggaagcaatggcttggcatgtgatagagacattaaaagaaaagaaa
gcaatcagtaatgaaaacaacatttatagagtagtctttaatgagataacaaaaagagca
gtacaagaagcaataaaaaatccacgtgaaattaatatggatttagtgcgtgcacaacaa
gcacgtagagctttggattatctagttggatttagtttgtcaccactgctgtggacaaaa
ttgtcgggaagcaagtctgcagggcgagtgcagtctgttgcattaaagattatatgcgaa
cgagaagatgaaattagtaaatttataacacaggagtattggagcataaaagcagaaatg
caaaatagcaaagatgaggctttttttgctatgctaagccactatgacaataaaaagcta
gaaaaatttgatattaagaatgaagaagaagcaaagaacttagtcagggagattgaatca
aggcaatatgctgtaagcacagtagaacgcaagcaagttaagagaaacccgcttcctccg
tttattacttcaagtcttcagcaagatgcagtgaataaactgtattttaatgtgaaaagt
gttatgcgcatagcgcaaaatttatatgaaggtatcgatattggtggtgaaactgtaggg
ttgataacttacatgcgtacagatgggtttcatattgcagatgaggctataaactcaatt
agagggtcaattaagtcattatatggtgataaatatttaccgcagtctcctcgtaaatat
gtaaaaaaggtcaaaaatgctcaagaagcacatgaagcaattcgtccaactgatatcaat
agaacgccgggtagtattaaggattacttaacgccagagcaatttaaattgtatgattta
atctggaaaaggaccattgcaagtcaaatggagtcggcgatttttgatcaagtggtagtc
gaaattagttctactgaccagaaagtaattctgcgagcaagtggatcaagtatattcttt
gatggtttttatagagtctaccaagataacatagaagccgaaaatgaaggcctgctacct
gccatgaaggaaggggaagcgtgtaagctgatttcagttgagccaaaacaacatttcact
caaccgccacctcgttatagtgaagcaagtatcgtaaaaaaaatggaagaaatcggtata
ggtcgaccatcaacttatgcaacaattatttcggtattacaagatcgtgagtacgtttca
ttggatagcaaaaggtttattccaagcagccgcggtaaaatcgttactatatttttagaa
actttttttcagcgttgtgtagagtatgatttcacagcacaaatggaagagaagcttgat
ttaatttcaaatggacatgcagattggaaaaaagaattaggccacttttgggtgccattt
tttggtcatgtaaactctgtcaagcaaatgacgcatgatgaagttttcagcggcattcac
gatttggtaatcgattggttttgttcagaagaaggaaaaaaagaggtgaatacaaaatgc
cctgcttgctctgatggcatattgaaattgaactttggaaaagccggggtgttccttgga
tgttctaattatcctgaatgcaaccatacaaaagaaattacgggcagtaacgacaattca
gaatatccaaaaagtttaggtatagatgatataacaaaccaagaagtgatgatcaaaaag
ggtccttttggactttatctggagtttaataacgagttaaaaaagaaaaaaacggtttcc
ataccaaaagatataaatgttaatgagattgatctgagcaccgctactcagttactttcc
ttgccaaaagtaatcggagaacaccctgaaaccggaaaggaagtaaaaataggccttggg
cgatttgggtactatattttctatgatggtagatacttttctcttaagaaaagctccaaa
gaggtgctgaatagagaattgagcgaagttgtacaaattattgcaaacagtccatgcaaa
gagttaaaatctctcggggttaatgaaaagggaaaagaagtttttatctgcaacggtagg
tacggattctatataaaatgcggtaaaacaaacgttgctttgggcaagagtgcagatatt
gaaagtatagatctggagaaggctttagagttgattaagaataagaagtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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