KEGG   Wenyingzhuangia fucanilytica: AXE80_10010
Entry
AXE80_10010       CDS       T04444                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
wfu  Wenyingzhuangia fucanilytica
Pathway
wfu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:wfu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AXE80_10010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wfu03019]
    AXE80_10010
   03009 Ribosome biogenesis [BR:wfu03009]
    AXE80_10010
Messenger RNA biogenesis [BR:wfu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AXE80_10010
Ribosome biogenesis [BR:wfu03009]
 Prokaryotic type
  rRNA helicases
   AXE80_10010
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 UTP25 Helicase_RecD Helicase_C_2 AAA_19 Flavi_DEAD
Other DBs
NCBI-ProteinID: ANW97492
UniProt: A0A1B1Y9P0
Position
complement(2481792..2482862)
AA seq 356 aa
MKEIGVKTPTEIQYRTIPKLLDGQIDYIGKAQTGTGKTIAFGLPLLQKINPKKNQIQALV
LAPTRELAQQIKKQLFKLTKYAPERIFCEAVYGGEKIDVQIERLERTTHVVVATPGRLCD
LLDRAAIDISNIKMMVLDEADEMLSMGFLPDLNRILKYSTASKNTWLFSATFPNALNSLV
KTYMNNPVRVEVEANQLINENISHKFISTTLGQKLDVLISFVESRGMEKGIVFCKTKLGA
QKLKEELAEEGFSVTALEGDMGQRDREKSLRSFKNGASQLLICTDVAARGIDVPNVNYVI
HYQLPENTEYFVHRSGRTARGGNKGLSLAIVLSKELEQLQALQKEFKIHFGKYTIA
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgaaagaaataggagtgaaaacacctacagaaatacaatacagaaccattcctaaattg
ttagatggacaaatagattatattggtaaagcacaaacaggaacgggtaaaaccattgct
tttggattgccgttgttgcaaaaaataaacccaaagaaaaaccaaattcaagcattggtt
ttggctccaacaagggagttggctcagcaaataaaaaagcaattatttaaattaaccaaa
tacgctccagaaagaattttttgcgaagctgtatatggtggagaaaaaattgatgtacaa
atagaaaggttagaaagaactacacatgtggtagtggctactcctggtcgtttgtgcgat
ttgttagatagagctgctatagatattagcaacataaaaatgatggtgttagatgaggct
gatgaaatgttaagcatgggatttttaccagacttaaatagaattttaaaatattctaca
gcatctaaaaatacatggttgttttctgcaacgtttccaaatgctttaaatagtttggtt
aaaacatatatgaacaatccagttcgtgtagaggtggaggccaatcaattaattaacgaa
aatatttctcataaatttatctctactactttaggacaaaagttagatgtgctaattagt
tttgtagaaagtagaggaatggaaaagggaattgtgttctgtaaaacaaaattaggagct
caaaaactaaaagaagaattggcagaagaaggtttttctgttactgctttagaaggtgat
atgggacaacgtgatagagaaaaatcgttacgttcttttaaaaatggagctagccaatta
ttaatttgtacagatgtagcggcaagaggaattgatgttcctaatgtaaactacgtaatc
cattatcaattgccagagaatacagaatattttgtacacagaagtggtagaacggcaaga
ggaggaaacaaaggattgtctttagccattgtgttgtctaaagaattagaacaattacaa
gctttgcaaaaagaatttaaaatccattttggaaaatatacaattgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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