KEGG   Wallemia ichthyophaga: J056_000932
Entry
J056_000932       CDS       T03457                                 
Name
(RefSeq) putative tRNA-splicing endonuclease subunit sen2
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
wic  Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:wic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:wic03016]
    J056_000932
Enzymes [BR:wic01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     J056_000932
Transfer RNA biogenesis [BR:wic03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    J056_000932
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 20373884
NCBI-ProteinID: XP_009268835
UniProt: R9ADW1
Position
Unknown
AA seq 397 aa
MAANPPPRNNTAHKRIKQHQNRIYANPLPVLIDQRPSTFLAGLSRFGQKSLINPQCVGVY
IKQTQSVWVINERDVRVLWTRGFFGKGSLSRSEPTWNDRQRKLAVGDKPQPTAEEITSKR
RIERNKMKIERAKVLSEAQLAAEAALEGSDSIKLSPPMPADDNDNLPLNEKSSNPIEPSS
PPKWEPLEPDTQEEQQDLSNAEHLQLTLPEAFFLAWGIGCLKIVDPYTDAVIPINQLWKE
CRLASMFLQNAPDSRDTCLQRLDNPFLVNYAIYHYYRSLGWVIKSGIKFCVDIVLYKRGP
VFHHAEFAVVICPTYEDQRDKESSPFDLHNSDKLSWQWLNTINRVNGQAKKTLILAYVQI
PSQEKVRNLDDPAKLLAEYRVKEVVLKRFVAARNRDN
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggctgcaaatccaccaccaagaaacaatacagcgcataaaagaataaaacagcatcag
aatagaatatacgccaatccactcccagttctcatcgatcagaggccgtcgactttcttg
gccggtttgagtagatttggacagaaatcgctaattaatccgcaatgcgtgggcgtgtac
atcaagcaaacccaatccgtgtgggttatcaacgagagagacgtcagagtgctctggact
agaggattctttggcaaaggttcacttagccgctctgagccaacttggaatgaccgtcag
cgtaaattggccgttggtgacaaaccacagccaactgctgaagaaattacctccaagaga
cgtatagagaggaacaaaatgaagattgaaagagcaaaggtcttatctgaagctcagttg
gccgctgaggctgctttggagggctctgatagtataaaactgtctccaccaatgcctgca
gatgacaacgataacctgcctttaaatgaaaaaagctctaatccgattgagccgtctagt
ccaccgaagtgggaacctctagagcctgatacacaagaagaacaacaagatttgtccaat
gctgagcatctccaactcactcttccagaggcctttttcttggcttgggggattggctgt
ctgaagattgtggatccatacacggacgcggtgatacccatcaatcagctctggaaggag
tgcagactagcttcaatgttccttcaaaacgctccggattcaagagacacttgcctgcag
cgcctcgataacccattcctagtcaattatgccatctatcactactacagatcgctagga
tgggtgataaagagtggtatcaagttctgcgtagacattgtgctctataagcgtggccca
gtcttccaccacgcagaatttgctgtcgtcatttgtccaacatacgaggatcaacgagac
aaagagtcgagtccatttgacctgcacaattcggacaagctcagctggcagtggctcaac
accataaatagggtgaatggacaagctaaaaagactttaattctcgcgtacgtgcaaata
ccatcccaagaaaaggttcgcaacctcgatgacccggctaaactgctggccgagtataga
gtgaaggaggttgtacttaagagattcgtagctgccaggaatagagataattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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