KEGG   Wallemia ichthyophaga: J056_002084
Entry
J056_002084       CDS       T03457                                 
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
wic  Wallemia ichthyophaga
Pathway
wic03013  Nucleocytoplasmic transport
wic03015  mRNA surveillance pathway
wic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    J056_002084
  09122 Translation
   03013 Nucleocytoplasmic transport
    J056_002084
   03015 mRNA surveillance pathway
    J056_002084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wic03019]
    J056_002084
   03041 Spliceosome [BR:wic03041]
    J056_002084
Messenger RNA biogenesis [BR:wic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     J056_002084
Spliceosome [BR:wic03041]
 Complex C
  Other components
   EJC/TREX
    J056_002084
SSDB
Motif
Pfam: RRM_1 RRM_3
Other DBs
NCBI-GeneID: 20375036
NCBI-ProteinID: XP_009266223
UniProt: R9AV79
Position
Unknown
AA seq 164 aa
MSDTNMQLDRDPAMSRKGRGFGGGDGDRDAKRDGDYERVEDQMAFDSKAAKSVEGWVILV
TNIHEEASEEDVQDKFADFGHIRNLHLNLDRRSGYVKGYALLEFESYEDAKKAVDHASGT
ELLEKVVHADFAFSVPPPGFQDGAAKQKQKQNHDRRRSGSPSSK
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtccgatacgaatatgcagctcgatagggaccctgccatgtccagaaaagggagagga
ttcggcggaggcgatggcgatagagatgcaaaaagagatggcgactacgagcgtgtagag
gatcaaatggctttcgatagcaaagctgcaaaatccgttgagggatgggtaattctcgtc
acgaatatccacgaagaggcttcggaggaggatgtacaggataaattcgcagacttcggc
catattcgtaacttacacctcaatttggatagaaggtcggggtacgtgaagggatacgct
ctgctcgaattcgagtcgtacgaagacgcaaagaaggcagtcgatcacgctagcggcact
gaactgctcgagaaggttgtccatgctgattttgccttctcagttcccccacctggattc
caagatggggcagctaagcagaagcagaagcagaatcacgacagaagacgcagtggatcg
ccatctagcaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system