KEGG   Wallemia ichthyophaga: J056_004780
Entry
J056_004780       CDS       T03457                                 
Name
(RefSeq) Transcription initiation factor IIE subunit alpha
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
wic  Wallemia ichthyophaga
Pathway
wic03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    J056_004780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:wic03021]
    J056_004780
Transcription machinery [BR:wic03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     J056_004780
 Prokaryotic type
  Archaeal type
    TFE
     J056_004780
SSDB
Motif
Pfam: TFIIE_alpha DUF4647 zf-H2C2_2 zf-C2H2
Other DBs
NCBI-GeneID: 20377732
NCBI-ProteinID: XP_009268245
UniProt: R9AFI4
Position
Unknown
AA seq 385 aa
MHAAIANETDERRLKSLVQHVGRSFYESKYFIILDQLIRKEAMQDGEVAGRIGLTVKDSS
KLIAKLIADKLVFHYRRNEYQPPNPRPLLKTYYYIDYQQFVDNVKWRMWRIRKAIDDKLR
NELDQKGYVCPGCHKTFTPLDVLHLNSTTDTFLCDTCNAPLKDNDESDGVKGSQDMMARL
LMQCRHIIAGLKLTEDMTLPPFDIADWISKNVKAITQPIKELEGEDDGLAVAGSGSNAAN
NKSQVRVQIVADEHDDEHKKKMEREEEERRTKNALPEWVLRSTISGEITAVGHRNQSIRD
KSREEDVTQNQSDGQEKLNVDQYYNDYYSNYNTLKRSQSPYQETTNKRLKQDTGTTNVAQ
AHSSQHQPGDGDEDSEEDDDFEQVA
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgcacgcggcgattgctaacgaaacggatgaaaggagattgaagagcctggtacaacac
gtcggaagatctttctatgaaagcaaatattttataattcttgatcagcttataaggaag
gaagctatgcaggacggtgaagtcgctgggagaattggacttacggttaaagatagctcg
aagctaatcgctaaattgattgctgataagcttgtctttcactatagacgcaatgaatac
cagcctccgaatccacgccctctattgaaaacatattattacattgattaccagcaattc
gttgataacgtcaaatggcgtatgtggagaatcagaaaagctatcgacgataaactcaga
aatgaactcgatcaaaaaggttacgtttgtccaggttgtcacaagacattcactccactc
gacgtcttacatttgaattccacgacagatacattcctatgtgatacgtgcaatgctcca
ctcaaagacaatgacgagtccgacggtgtcaaaggttcacaagacatgatggcaagactt
cttatgcaatgtcgacatatcatagctgggttgaagctcaccgaagatatgacactgcca
ccatttgacattgcagattggataagtaagaacgttaaggcaattacacaaccaatcaaa
gaactcgaaggcgaagatgatggactagccgtagcaggtagtggatccaacgcagctaac
aacaagtctcaagtgagggttcaaatagttgcagacgagcatgacgatgagcataagaag
aagatggagagagaggaagaggagagacgaacaaagaatgcgctaccagaatgggtactt
aggagcacgatatcaggtgaaatcacagctgttggtcacagaaaccaatccataagagac
aagtcgagagaggaagatgtcacccagaatcaaagtgatggccaagagaagctaaacgtt
gaccaatactacaatgattattactccaattacaacactttaaagcgatctcagtcgccc
tatcaggaaacaaccaacaaacgtttgaaacaagataccggaactacgaatgtagctcaa
gctcattcatcacagcatcaaccaggagatggagatgaagattcagaggaagacgatgac
tttgaacaggtagcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system