KEGG   Wolbachia wMel (Drosophila melanogaster): WD_0776Help
Entry
WD_0776           CDS       T00160                                 

Gene name
ligA
Definition
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
wol  Wolbachia wMel (Drosophila melanogaster)
Pathway
wol03030  DNA replication
wol03410  Base excision repair
wol03420  Nucleotide excision repair
wol03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:wol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WD_0776 (ligA)
   03410 Base excision repair
    WD_0776 (ligA)
   03420 Nucleotide excision repair
    WD_0776 (ligA)
   03430 Mismatch repair
    WD_0776 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wol03032]
    WD_0776 (ligA)
   03400 DNA repair and recombination proteins [BR:wol03400]
    WD_0776 (ligA)
Enzymes [BR:wol01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     WD_0776 (ligA)
DNA replication proteins [BR:wol03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     WD_0776 (ligA)
DNA repair and recombination proteins [BR:wol03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     WD_0776 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WD_0776 (ligA)
   MMR (mismatch exicision repair)
    DNA ligase
     WD_0776 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      WD_0776 (ligA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT zf-NADH-PPase TPD52 DNA_RNApol_7kD
Motif
Other DBs
NCBI-ProteinID: AAS14465
UniProt: Q73H01
Position
complement(749026..751014)
Genome map
AA seq 662 aa AA seqDB search
MTNLEKMREKLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIEPEIYATQDSVGAPP
DERFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIEDKIEILCEPKIDGLSFSAIYED
GRFVKAATRGDGFVGEDVTHNVATIKGFPKFLQGVQGRLEVRGEIYISNSDFLKLNENDE
FANPRNAAAGSLKQLDANITASRPLRYFAYSLIGGAEKSQSEVLNKLEALGFCVNEHQSL
TSSLDGMLKFYNEVYNCRYNLDYDIDGIVYKVNDLVLQNRLGNTHKAPRSALAYKFSAVY
AKTKLNKIFIQVGRTGVLTPVADLVPVNVGGVLVSRASLHNQDEIKRKDIREGDIVTIKR
AGDVIPQIVEVSRDSRLPNTPEFVFPEVCPECGSKVRQVEGEAAVRCPEEFACKAQMIEK
LKHFVSKDAFDIVGLGDKQIEFFYDLGLIKQIHDIFTLEERLDEFNLEEQSGWGEKSIAN
LLNSIQSRRVITLDRFIFSLGIRFIGQVAAELLADYYVSYNNWYNSMIELSLDNTELVGI
DGIGKKGAESLESFFSKEHNIKMLNDLTACLQILPVSSNSSNSVLNNKIIVFTGKLLAMS
RGEAKVRAKTLGAKVSSHLSAKTDYLIAGEKPGSKYKKAVELGVEILDEDQWHKVISLGV
FK
NT seq 1989 nt NT seq  +upstreamnt  +downstreamnt
atgactaacttagaaaagatgagagaaaaactgcaagatcaaataaattatcataatgtt
ttgtatcaccaaaaaaataagccagaaataagtgatgctgaatatgatgaactgaagaaa
aagttagctgaaatagagccagaaatttatgcaacacaagatagtgttggtgctccacct
gatgagaggttttctaaggtggaacatcaagaacctatgctttcccttgagaatgcttat
gatgaacaaggtgtagagaaatttttgtctaaaataaagaggtttttaattgaggacaaa
atagagatattatgtgaaccaaaaattgatgggttgtcgttttctgcaatttatgaggat
ggaagatttgttaaagctgcaactcgaggtgatggttttgtaggggaagatgtcactcac
aatgttgcaacaataaaaggctttcctaagtttttgcaaggtgtgcaaggaagactagaa
gtaagaggtgaaatatacatcagtaacagcgactttttaaagttaaatgaaaacgatgaa
tttgccaatcctcgaaatgcagccgctggttctctaaagcaattggatgcaaacattaca
gcaagcagacctcttagatattttgcttattctttgattggtggagcagagaaaagtcaa
agtgaggtactaaataagcttgaggcacttggtttttgcgtaaatgagcatcagtcctta
acgagtagtttagatggaatgctgaagttctataatgaagtctataactgtcgctataac
ttggattatgatattgatggaatagtctataaagtaaatgatttggtactacaaaatcgt
ctagggaatactcacaaagcaccgcgctcagcacttgcatacaagttttctgcggtttat
gcaaaaacaaagttaaacaagatatttatacaggtgggcagaacaggggttttaactcca
gttgcagatttagtgccagtcaatgttggtggggtgctagttagtagagcaagtctgcat
aaccaagatgagataaaacgtaaagatataagagagggagatattgtaacaatcaaaagg
gcaggtgatgtaattccccagatcgttgaagtaagcagagattctcgtcttccaaataca
cctgaatttgtgtttcctgaagtatgccctgaatgtggtagtaaagtacgtcaggttgag
ggagaggcagcagtaagatgtcctgaggaatttgcctgtaaagctcaaatgatagaaaaa
ctaaagcattttgtatcgaaagatgcatttgacattgttggccttggtgataagcagata
gagtttttttacgaccttggtctgataaaacaaatccatgatatttttactttagaagaa
agattggatgaatttaatctggaagaacagtctggttggggcgagaaatctatagctaat
ttgttaaattctatacaaagcagaagggtaataactctagataggtttatattttcttta
ggtattagatttattggccaagttgcagcagaattgcttgcagattattatgtttcttat
aataactggtataattcgatgattgaactgtcattagataatactgagctagtaggtata
gatggcataggaaaaaaaggggctgaatctttggaatcatttttttctaaggaacataac
atcaaaatgttaaatgatcttactgcttgtcttcaaattcttcctgtgagctccaactct
agtaactctgttttaaataataaaattatagtgtttactggtaagctacttgctatgagt
agaggagaggcaaaagtaagagccaaaactctgggagcaaaggtcagctcacatctttct
gctaaaactgactacctaattgcaggagaaaaaccaggatccaaatataaaaaggcagtg
gaattaggtgtagaaattttagatgaagaccagtggcataaagtgataagtttgggagtg
ttcaaatga

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