KEGG   Wallemia mellicola: WALSEDRAFT_60553
Entry
WALSEDRAFT_60553  CDS       T03142                                 
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
wse  Wallemia mellicola
Pathway
wse03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    WALSEDRAFT_60553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:wse03021]
    WALSEDRAFT_60553
Enzymes [BR:wse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     WALSEDRAFT_60553
Transcription machinery [BR:wse03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     WALSEDRAFT_60553
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 NRDD Lac_bphage_repr
Other DBs
NCBI-GeneID: 18474024
NCBI-ProteinID: XP_006958721
JGI: Walse1_60553
UniProt: I4YBN3
Position
Unknown
AA seq 1152 aa
MLEDEDVDVKPKITESDDWTTPGNFHGKSLTDEVKTVEDKWQLLPAFLKTRGLVKQHIDS
YNHFVDVELKNIIKANEKVTSDVDPKFYLKYTDIHVGNPERQDADSVDKSITPHEARLRD
MTYSAPIRISVEYTRGKQIVRRRGIPIGRLPVMLRSNKCILSGKDEETLARYRECPLDPG
GYFVVKGTEKVILVQEQLSKNRMIIETDPKKNVQASVTSSTHERKSKSYVATKNGKIYLR
HNSIGDDVPIVVALKAMGVTSDKEILQLVAGHDDEYKEVFYINIEEALRMGIHTEMQALE
WIGARSKSARRAVGPAHQKRPVWEDAIETLSTIVLAHVPVENLNFRPKAIYVAVMVRRVL
MAMVDEKMLDDRDYVGNKRLELAGQLLSLLFEDLFKKFNHDLKLNIDKVLKKPNRTTEFD
AYTQLLYGGDHITSGFVRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQF
EKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVEEEPIVNICYMLG
VEDVCLLTGTELYRRDTYIVSLNGNLIGVTRHPLKFVTQFRKLRRNGFINEFVSVYINHH
HNSVNISSDGGRICRPMIIVENSFSKVTSEHIKMLKAGKIDFDAFLTQGLVEYLDVNEEN
DAYIAISENDITETSTHLEIEPFTLLGACAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAY
NQLNRIDTLLYLMVYPQQPMVKTKTIELIGYDKLPAGQNAMVAVMSYSGYDIEDALILNK
ASLDRGFGRCQVMRKYSTMIRKYPNGTHDRLADAPIGLDGVIPKKYQALEPDGIAGAGER
VDTNDVIVNKQSPSNALDNSINPGQADSSTYKNAPMSYKSPVPGFVDQVLITDTESEQTL
VKALLRQTRRPELGDKFSSRHGQKGVCGLIVPQADMPFNDRGITPDVIMNPHGFPSRMTV
GKMIELLSGKAGVIRGTLEYGTAFGGSKVDDMSQVLIDNGYSYAGKETMTSGITGECHTF
YTYLGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDALLGYGA
AHLVRERLMLSSDLFHVDVCNDCGTMGYNTFCPMCKSQKNISNIQIPYAAKLLFQELLAM
NIYPKISLEDAV
NT seq 3459 nt   +upstreamnt  +downstreamnt
atgctggaggatgaggacgttgatgtcaagccaaaaatcacagaatctgatgattggacg
actcctgggaactttcacggtaaatcgctcacagatgaggtaaaaaccgtcgaagataaa
tggcaacttctaccagcatttttgaaaactagaggtcttgttaagcagcatatcgattcc
tacaaccactttgtagacgtagaattgaagaatattataaaagcaaatgaaaaagttaca
agcgatgtcgacccaaagttttaccttaaatatacagatatccacgtaggcaacccagag
agacaggatgcagactcagtagataaatcaattacccctcatgaagccagattgagagat
atgacctacagtgcaccaatcaggatcagcgtcgaatacaccagaggtaaacaaatcgtt
agaaggagaggtattcctattggtagattacctgttatgttgaggagcaataaatgtata
ttgtcaggaaaggatgaagagactttagcacgctatcgagagtgtccgcttgatccaggt
ggttattttgttgttaaaggtacagaaaaggtcatcctcgtacaagaacaactttcaaag
aaccgtatgattatcgaaactgatccaaaaaagaatgtccaagcttccgtcaccagttct
acccatgaacgtaaatctaagtcatacgtcgcaacaaagaacggaaagatttatcttcgt
cataactccattggtgatgatgtccctattgtagtcgctcttaaggctatgggtgtcaca
tctgataaagaaattttgcaattggttgcaggacacgatgatgagtacaaggaagttttc
tacattaacattgaagaggcgcttagaatgggtattcacactgaaatgcaggcgcttgag
tggattggcgctagaagtaaatcagctagacgtgcagttggaccagctcatcaaaagcgc
ccagtttgggaagatgctatcgagacactcagtactatcgtcttggcacatgttcctgta
gagaaccttaatttccgtccaaaagctatctacgttgcagtcatggttagaagagtactt
atggctatggtcgacgaaaagatgcttgacgatcgtgattatgttggtaacaagcgtcta
gagttagctggacagctcctttcacttttgttcgaagatttattcaagaagtttaatcac
gatctcaaactcaacatcgacaaggtgctcaagaaaccaaatcgtacgactgaatttgat
gcttatacgcagcttctttatggtggcgatcacatcacatctggtttcgttagagcaata
tcaacgggtaattggtctctgaagcgtttcaagatggaaagagcaggtgttacgcatgtc
ctcagtagattaagttatatttcagctcttggtatgatgactagaatttcttctcaattc
gaaaagacgagaaaggtttctggtcctcgtgcacttcaaccatctcaatggggtatgctt
tgtccgtccgatacaccagagggtgaggcttgtggtttggtcaaaaacttggcgcttatg
acccacattactactgatgttgaggaagaaccaattgtcaatatttgttacatgcttggt
gtcgaagatgtttgtttactcactggtacggagttatatagacgggatacctacattgta
tctcttaatggtaacctcatcggtgtcaccagacatccactcaagtttgttactcaattt
agaaagcttcgtcgcaacggatttatcaatgaattcgtttctgtctacatcaatcaccat
cacaattctgtcaatatttcttcagatggtggtcgtatctgtagaccaatgattattgtc
gaaaattcattctcaaaggtcaccagtgaacacataaaaatgctcaaagcaggtaagatt
gatttcgatgcctttttgacacaaggtttggttgagtaccttgatgtaaacgaagaaaat
gatgcatacatcgctatcagcgaaaatgacataacggagacatctacacatttggaaatt
gaaccattcacacttctcggtgcttgcgctggacttattccttaccctcaccacaatcaa
tcacctagaaacacttaccaatgcgcgatgggtaaacaagctataggcgcaattgcttac
aaccaacttaaccgtattgatacattgctttacttgatggtttatcctcaacaaccaatg
gttaagactaagacaattgaattgattggatatgacaaattaccagcaggacaaaatgct
atggttgctgtcatgtcttactcaggttatgatattgaggatgctttgattttgaacaag
gcatctctcgatcgtggctttggtcgttgtcaagttatgagaaagtattctacgatgatc
cgtaaatatccaaatggtacacacgatcgtctcgcagatgcaccaattggattggatgga
gtgataccaaagaagtatcaggcgcttgaaccagatggtattgctggtgctggtgaacgt
gtagacacaaacgatgttatcgtcaacaagcaatcaccttccaacgctctcgataattcc
atcaatccaggtcaagcagattcatcaacttataagaatgcaccaatgtcttataaatca
cctgtaccaggttttgtcgatcaggtcttgatcactgacacagaaagtgaacaaaccctc
gtcaaagccttacttcgtcaaactcgtcgtccagaattaggtgataaattctcatcccgt
cacggtcaaaaaggtgtttgtggtttaattgtacctcaagcagatatgcctttcaacgat
cgtggtataacaccagatgttattatgaatcctcatggtttcccatctcgtatgacagtc
ggtaaaatgattgaattgttgtctggtaaagctggtgttataagaggtacacttgaatat
ggtacagcatttggtggatcgaaagtagatgatatgtcacaggtacttatagataatggt
tattcatacgctggtaaagaaaccatgacgagtggtattactggtgaatgtcacactttc
tatacatatctcggcccaatttattatcaaaaattgaagcacatggttcttgacaagatg
cacgctagagctcgtggtccacgtgcagttctcactcgtcagcctacagaaggtcgttcc
agggatggtggtcttcgtcttggtgagatggagcgtgacgctttacttggttatggtgct
gctcatcttgtcagagaacgtctcatgttgtcatctgatttattccatgttgacgtttgc
aacgactgtggtacgatgggctacaataccttctgtccaatgtgtaagagtcagaaaaac
atttcaaacatccaaattccatatgccgccaaacttctcttccaggaactcctcgccatg
aacatatatccgaagatcagtcttgaggatgctgtttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (46)   

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