KEGG   Wolinella succinogenes: WS1501
Entry
WS1501            CDS       T00146                                 
Symbol
TOPA
Name
(GenBank) DNA TOPOISOMERASE
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
wsu  Wolinella succinogenes
Brite
KEGG Orthology (KO) [BR:wsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wsu03032]
    WS1501 (TOPA)
   03400 DNA repair and recombination proteins [BR:wsu03400]
    WS1501 (TOPA)
Enzymes [BR:wsu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     WS1501 (TOPA)
DNA replication proteins [BR:wsu03032]
 Prokaryotic type
  DNA Topoisomerases
   WS1501 (TOPA)
DNA repair and recombination proteins [BR:wsu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      WS1501 (TOPA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim DUF1272 RNA_POL_M_15KD Auto_anti-p27 Toprim_2 Toprim_4
Other DBs
NCBI-ProteinID: CAE10553
UniProt: Q7M8P6
Position
complement(1435293..1437518)
AA seq 741 aa
MKNLIIVESPTKAKTIKNFLGKEYEVIASKGHIRDLPKHNFGIKIEGQSFLPDYKIEKGH
EAVVKEIKALAQKAKTIYIATDEDREGEAIGYHISHAIDKDPTTLPRIVFHEITQNAIKH
ALETPRSINMDMVNAQQARRLLDRIVGYRLSPLISSKIQKGLSAGRVQSSALKLIVDRER
EIRSFVPVTYFTIEALFEKGIEAELIEFEGEKLEKLSIGESKKANEMVKVLQKESWSITG
IEHKRRKTSTPPPFMTSTLQQSASSVLGFSPSKTMMAAQKLYEGVMTHQGVMGVITYMRT
DSLNIAKEAQEAARSRIKEVYGERYLPKEPKVYTTKSKSAQEAHEAIRPTLIDFTPQLAA
QYLKGDELKLYSLIYNRFLASQMNDAEFELQTILLGSSKGVFKVSGRKLIFDGFYRVMGS
EDKDKLLPELQKGEALKLEECKANRHETEPPARFSEASIIKTLEALGIGRPSTYAPTISL
LAGRDYIRIEKKQIIPEEVAFKVIEVLEAHFTEIVDSHFTATLEEELDEIAESKKDWQKV
LWDFYEKFDAKIALGKKNIESQKVAIPTGEMCPKCGAELVRRMSRYGEFVACSGYPKCKY
IKPQESSPEQEGEESEEVCEKCGKPMVKKRGRNGEFLACSGYPDCKNTKSLKKSSTPKKV
LEVKCPKCGGEIIERSSRRGNFFGCANYPKCDFISSHEPINEKCQKCGGMMAKRTYRKKE
VHECIACKDRIEVEERNEEEK
NT seq 2226 nt   +upstreamnt  +downstreamnt
ttgaaaaacctgattattgtcgaatcaccgaccaaggctaaaaccatcaaaaattttttg
ggcaaagagtatgaagtgatcgcctccaaggggcatatccgcgatcttcccaagcacaac
tttggaatcaagatagaggggcagagctttctccctgactacaagattgaaaagggtcac
gaggcagtcgtgaaggagatcaaagcgcttgcccaaaaggccaaaaccatctatatcgcg
accgatgaggatcgagagggagaggcgattggctatcatatctcccatgcgatcgacaaa
gaccccactacactcccgcgaatcgtctttcacgagatcactcaaaacgccattaagcac
gccctagagactcctcgctccatcaatatggacatggtgaacgctcaacaggcgaggcgt
ttgttagatcgaatcgtgggttatcgcctctctccgctgatctcttccaagattcaaaaa
gggttgagcgcgggtcgagtccaaagtagcgctctaaagctcatcgtagatagggagagg
gagattcgctcctttgtgcctgtgacttacttcacgattgaggcgctctttgaaaaggga
atcgaggcggaactgattgagtttgaaggggaaaaactagagaagctctccatcggagaa
tctaaaaaagccaacgagatggtcaaggtgcttcaaaaagagagctggagcatcacggga
attgagcataaaagacgcaagacctccactcctcccccctttatgacctccacgcttcag
caaagcgcctcttcggtgcttggattttcacctagcaaaaccatgatggcagcccaaaag
ctctacgaaggggtgatgactcatcagggggtgatgggagtgatcacctacatgagaacc
gatagcctcaatatcgccaaagaggctcaagaggcggctagatcaagaatcaaagaggtc
tatggggagcgttatctgcctaaagagcccaaagtttacacgactaagtctaaatccgcc
caggaggcgcacgaggcgattcgtcccactctaattgacttcactccgcaattagccgca
caatatctcaaaggcgatgagctcaagctctactcgctcatctataatcgattccttgcc
tcgcagatgaatgatgcggagtttgaactccagactatcctgcttggctcctccaagggg
gtctttaaggtgagcgggcgcaagctcatttttgatggtttttatcgtgtgatggggagc
gaggataaggataagcttctgccggagctccaaaaaggagaggcactcaaactagaagag
tgcaaagccaatcgccatgagacggagccgcccgcaagattctctgaagcctctatcatc
aaaacgcttgaagccttaggaatcggccgcccctccacctatgcaccgactatctcgctt
ttggcgggtcgtgactacatccgaatcgagaagaagcagatcatccctgaagaggtcgcc
tttaaagtgatcgaggtgctagaggcgcatttcacggagattgtggatagccatttcacg
gcaacccttgaagaggagctcgatgagattgccgaatcaaagaaagattggcagaaggtg
ctttgggatttttatgagaagtttgatgccaagatcgccctgggcaaaaaaaatattgaa
agtcaaaaagtggcgatccccacaggcgagatgtgccccaagtgtggtgcggagctggtg
aggcgcatgagtcgatatggggagtttgtcgcttgcagtggctatcctaagtgtaaatat
atcaaacctcaagaatcatctcctgagcaagagggcgaggagagcgaggaggtgtgcgag
aaatgcggcaagccaatggttaaaaagcgcggacgcaatggtgaatttttggcgtgtagt
ggctatccagattgcaaaaacaccaagtctctcaaaaagagcagcacccctaaaaaagtc
ctagaggtgaagtgccccaagtgcggaggagagattatcgagcgttcttctaggcggggt
aatttctttggttgcgccaactatcctaagtgcgactttataagctctcatgagcctatc
aatgagaagtgccaaaagtgcggaggcatgatggccaagcgcacttatcgcaaaaaagag
gtgcacgagtgcatcgcttgcaaagatcgaatcgaagttgaagagagaaatgaggaagag
aagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (42)   

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