KEGG   Wolinella succinogenes: WS1825
Entry
WS1825            CDS       T00146                                 
Symbol
RUVB
Name
(GenBank) HOLLIDAY JUNCTION DNA HELICASE
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
wsu  Wolinella succinogenes
Pathway
wsu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:wsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    WS1825 (RUVB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wsu03400]
    WS1825 (RUVB)
Enzymes [BR:wsu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     WS1825 (RUVB)
DNA repair and recombination proteins [BR:wsu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     WS1825 (RUVB)
    RecFOR pathway proteins
     WS1825 (RUVB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase nSTAND3 Sigma54_activ_2 AAA_14 RNA_helicase NB-ARC AAA_22 Sigma54_activat ResIII AAA_18 AAA_3 AAA_2 NTPase_1 Rad17 AAA_28 Bac_DnaA IstB_IS21 AAA_17 AAA_16 TsaE AAA_PrkA
Other DBs
NCBI-ProteinID: CAE10840
UniProt: Q7M879
Position
complement(1718291..1719298)
AA seq 335 aa
MERIIEIEKMELEEAEEVSLRPSGWDDYIGQEKIKRNLGVFIEAAKRRGEGLDHILFFGP
PGLGKTTLAHIISHEMGANIKVTTAPMIEKAGDLAAILTNLSEGDILFIDEIHRLSASIE
EILYPAMEDFRLDIIIGSGPAAQTVKIDLPRFTLIGATTRAGMISKPLRERFGMNFWMQF
YNIEELSQIITLASIKLKKRCLLESAKEIARRSRGTPRVALRLLRRVRDFAEVANEEEIK
IEQARYALHELGVNDHGFDDLDLRYLRILVQSKGRPVGLGTIAAAMSEDEGTIEDVVEPY
LLAHGYLERTARGRVATRQTYELFSLPFEPNATLF
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggagcgtatcatcgagatagagaagatggagctagaggaagccgaggaggtttcgctc
cgtccaagcggctgggatgattacatcgggcaagagaagatcaagcgtaatctgggcgtc
ttcatcgaggcggccaaacggcgaggggagggcttggatcatattctcttttttggtcct
ccggggcttggcaagaccacgctcgctcatattatttcgcacgagatgggtgcgaatatc
aaagtcaccactgcgcccatgatcgaaaaagcgggggatttggcggcgattctcaccaat
ttgagcgaaggagatattctttttatcgatgagattcatcgcctctcggcttcgattgag
gagattctctaccctgcgatggaggattttcggctggatattatcatcggctcaggacca
gcggcacagacggtgaagattgatctgccaagattcacgcttattggagcgaccacgagg
gcagggatgatcagcaagccgcttagagagcgttttgggatgaacttttggatgcagttt
tacaacattgaagagctctctcaaatcatcacgcttgcttcaatcaagctcaaaaaacgg
tgtcttttagagagtgccaaagagatcgctagacgctctaggggcacgccaagggttgca
cttcgactacttcggcgggtgagggattttgccgaggttgctaatgaggaggagatcaaa
atcgagcaggcacgctacgcgcttcatgagcttggagtgaatgaccatggctttgatgat
ttggatttgcgctatttgaggattttggtgcagagcaaaggcaggcctgtggggcttggc
acgattgcagcggcgatgagtgaagatgaagggacgatcgaggatgtggtggagccctat
ctcttagcacacggctatctagagcgcactgcaagggggagggtggcgacccgccagact
tatgagctcttttcgctcccctttgagcccaatgcgacacttttttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (27)   
   Pfam (27)   
All databases (47)   

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