KEGG   Xanthomonas sp. ISO98C4: AC801_22080
Entry
AC801_22080       CDS       T06033                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
xan  Xanthomonas sp. ISO98C4
Pathway
xan03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AC801_22080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xan03400]
    AC801_22080
Enzymes [BR:xan01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AC801_22080
DNA repair and recombination proteins [BR:xan03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AC801_22080
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 AAA_11 UvrD-helicase SH3_13 Helicase_RecD AAA_22 UvrD_C nSTAND3 T2SSE DEAD AAA_16 SLFN-g3_helicase AAA_28
Other DBs
NCBI-ProteinID: AZU32449
UniProt: A0A3T0G4G1
Position
complement(5163788..5166295)
AA seq 835 aa
MTPPNLFAALNQSGALRTLDLAFAQSLQRLEPDTDPQVLAGAALASLAVTSGHAGLDPAR
AAMVLDARDGPPPTFPDPADWQRSLAASRWVDQPQPEAPAAADCPLVLERGLLYLRRYRE
YERRLALGLQRIAAQAPPPVDAATLAPLFAQLFPNATATPRSAAPTPLPPAEGARRAGEG
SALPAPSLQQEGTNPPAPSITGANQAAPARSPDRQAQAAALALRRMLLLVTGGPGTGKTT
TIARMLLLRIAQARTAGTSPPRIALAAPTGRAAERMAESLRLAVARAMEQGLPPPPATPT
PETSPLPPTAPDQDAFPLPPAGEGGRRAGEGSAPTDLPSTAPHPDAFPLPLAGEGARRAG
EGSALIDPHGNSALPSGASTLHRLLGVIPDSPHFHHNADNPLPFDLIVVDEASMVDLPLM
CKLVEAVADGTQLILLGDADQLPSVEAGDVLAAILQAAGPGDALQPEDAQALQPLLGSAP
VDPPAVTSATRSGGLAGHRVHLLRGYRQAEDFALAPLADAIRAGDADTALALLGSGELPG
VYFHEDGEDPLTLGRDALLAHWRALANAQDPAAALRDAARLRLLTAVRAGPQGARGLNAR
IEQLLADTGAGARRLGGASPWFQGRLLLITENSYRHGLFNGDVGICLRSDPGALPGRSDA
RPAPGQGDASAVTTRGHAPPSPRPGHAGDRVHHDAPATDSRAQGPLVAWFEGDGDGQVRG
FHPAALPAHESAFAMTVHKAQGSEFDEVWLQLPTRDARVLSRELLYTGLTRARRALHLAG
SEAVMRAALARHAARISGLAWRLGAKDDKPPPVPAPTPAPLPQPPPSAPVQGALF
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgacccccccaaacctgttcgccgccctcaaccagagcggcgccctgcgcaccctggat
ctggccttcgcgcaaagcctgcaacgcctggaaccggacaccgatccacaggtgctggcc
ggcgctgcgctcgcctcgctggcggtcaccagcggccacgccgggctggaccccgcccgc
gccgccatggtgctggacgcgcgcgacggcccgccgccgaccttcccggaccccgccgac
tggcaacgcagcctggccgcctcgcgctgggtcgaccaaccgcagcccgaggccccggcc
gccgccgattgcccgctcgtcctcgaacgcggcctgctctacctgcgccgctatcgcgag
tacgaacgccgcctggccctgggcctgcaacgcatcgccgcgcaagcgccgccgccggtc
gacgccgccacgctggcgccgctgttcgcgcagttgttcccgaacgccaccgcaacgcct
cgcagcgcggccccaacccctctccccccggcagagggcgcccgcagggcgggtgagggg
tcggccctgcccgcgccctccctccagcaagagggcacaaatccgcctgcgccgtccatc
acgggggcgaaccaggcagcgccagcccgcagccccgaccgccaagcccaggccgcggcc
ctcgcgctgcgccgcatgctgctgctggtcaccggcggccccggcaccggcaagaccacc
accatcgcccgcatgctgctgctgcgcatcgcccaggcccggaccgccggcacatcgccg
ccgcgcattgccctggccgcgcccaccggccgcgccgccgagcgcatggccgagagcctg
cgcctggccgtggcccgcgccatggagcaagggctgccgcctccccccgccacaccgacc
ccggagacgtcccccctcccacctaccgcaccggaccaagacgctttccctctcccgcct
gcgggagagggcggccgcagggcgggtgagggcagtgcgcccaccgatctcccgtccacc
gcaccgcacccagacgctttccctctcccgcttgcgggagagggtgcccgcagggcgggt
gagggcagtgcgctcatcgacccgcacgggaactccgccctgcccagcggcgccagcacc
ctacatcgtctgctcggcgtcatcccggattccccgcacttccaccacaatgccgacaac
ccgctgccgttcgacctgatcgtggtcgacgaagcgtccatggtcgacctgccgctgatg
tgcaaactggtcgaagccgtcgccgatggcacccagctgatcctgctcggcgatgccgac
cagctgccttcggtggaagccggcgatgtgctggccgccatcctgcaggccgccggcccg
ggcgatgccctgcagccagaggatgcccaggccctgcaaccgctgctcggcagcgcgcct
gtcgatccgcctgcggtcacctccgccacccgcagcggcggcctggccggccaccgcgtg
cacctgctgcgcggctatcgccaggccgaggatttcgcactggcgccactggccgacgcc
atccgcgccggcgatgccgacaccgccttggccctgctaggcagcggcgaactgcccggc
gtgtacttccacgaagacggcgaagacccgctgacactcggccgcgatgcgctgctcgcc
cactggcgcgcgctggccaacgcgcaagaccccgccgccgccctgcgcgatgccgcccgc
ctgcgcctgctcaccgcggtgcgcgccggcccgcaaggcgcgcgcggcctcaacgcccgc
atcgaacaactgctggccgacaccggcgccggcgcccgtcgtctgggcggcgcctcgccc
tggttccagggccgcctgctcctgatcaccgaaaacagctaccgccacggcctgttcaac
ggcgacgtcggtatctgcctgcgcagcgacccgggcgccttgcctggccgcagcgacgcg
cgcccggcccccgggcagggcgatgcaagtgccgtgaccacgcgtggccacgcgccaccg
tcgccaaggccgggccacgccggcgaccgcgtacaccatgacgcccccgccaccgacagc
cgtgcccaaggccccttggtcgcctggttcgaaggcgacggcgacggccaggtgcgcggc
ttccatcccgccgcacttcccgcgcacgaaagcgccttcgccatgaccgtgcacaaggcc
caaggcagcgaattcgacgaggtctggctgcaactgcccacccgcgacgcccgcgtactc
agccgcgaactgctctacaccggcctcacccgcgcccgccgcgccctgcacctggccggc
agcgaagcggtcatgcgcgccgcgctggcgcggcacgccgcacgcatctcggggttggcg
tggcgcttgggtgcaaaagacgacaagccaccgccagttccagcacccacgccagcgccg
cttccacaaccgccgcctagtgcgcctgtgcaaggtgcgctgttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system