KEGG   Xanthomonas arboricola: XB05_01005
Entry
XB05_01005        CDS       T06096                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
xar  Xanthomonas arboricola
Pathway
xar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    XB05_01005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xar03400]
    XB05_01005
DNA repair and recombination proteins [BR:xar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XB05_01005
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      XB05_01005
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 AAA_23 RsgA_GTPase AAA_25 nSTAND1 nSTAND3 DnaJ_CXXCXGXG AAA_21 NACHT Viral_helicase1 cobW FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AKC77476
UniProt: A0A0E3UCE9
Position
complement(229115..232081)
AA seq 988 aa
MAMDFIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQP
RCPDHGFPLEAQTVSQMVDHMLTQDQEQRYMLLAPVIRERKGEHAQVFEQLRAQGFVRVR
VDGELYEIDAVPPLALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGEGMVAVQSLD
DPAAAPHLFSSKYSCPVCDYSLPELEPRLFSFNAPVGACPSCDGLGVAEFFDPDRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIASLAKHYKFDVDAVWNTLPAKVRQAVLFGSGDEVISF
TYFTDAGGRTTRKHRFEGILPNLERRYRETESPAVREELTKYVSQQPCPACNGTRLNRAA
RNVFVADRPLPELVVLPVNEALSFFRGLSLPGWRGEIASKIVKEIGERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADYVLDIGPGAGVHGGEICAQGTLQDILDAPGSLTGQYLSGKRRI
EIPKQRHKPNPKMMLHLRGATGNNLKNVDLDIPAGLLTCITGVSGSGKSTLINDTLFSLA
ANEINGASHPVAAHREVENLDLFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVP
EARARGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEIR
YKGFNISDVLQMTVEDALRLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGSILVSGTPEDVAAHKASYTGQFLAKMLPSVKARETRPAAMANKPDA
RPPRKIKPEKVAKVAKSATKKTAKKKAS
NT seq 2967 nt   +upstreamnt  +downstreamnt
atggcgatggatttcatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgac
ctcgacctgcctcgcgacaaactgatcgtgatcaccggcctgtccggctcgggcaagtcg
tcgttggcgttcgacaccatctatgcagaaggccagcgccgctacgtcgagtcgctgtcg
gcgtatgcgcgccagttcctcagcgtgatggaaaagccggacctggaccacatcgaaggc
ctgtccccggcgatttcgatcgaacagaagtcgacctcgcacaacccgcgttccacggtc
ggcacgatcaccgagatctacgactacctgcgcctgctgtacgcgcgggtcggtcagccg
cgctgcccggaccacggcttcccgctggaggcgcagaccgtcagccagatggtcgaccac
atgctcacgcaggaccaggagcagcgttacatgctgctggcaccggtgatccgcgaacgc
aagggcgagcatgcgcaggtgttcgagcagctgcgcgcgcagggctttgtgcgcgtgcgc
gtggatggcgagctgtacgagatcgacgcggtgccgccgctggcgctgcgccagaagcac
accatcgaggcggtgatcgaccgcttccgtccacgcgaagacatcaagcaacgactggcg
gaaagtttcgagactgcgctcaagctcggcgaaggcatggtcgcagtgcagtcgctggac
gacccggccgcggcgccgcacctgttctcgtccaagtacagctgcccggtctgcgattac
tcgctgccggagctggagccgcggctgttttcgttcaacgcaccggtgggcgcctgcccc
agctgcgatggcctgggcgtggccgaattcttcgacccggatcgcgtcgtggtgcatccg
gagctgtcgctgtcggccggggcggtgcgcggctgggatcgccgcaatgcctattatttc
cagctgatcgcctcgctggccaagcactacaagttcgacgtggacgcggtgtggaacacg
ctgccagccaaggtgcgccaggcggtgctgttcggcagcggcgatgaggtgatcagtttc
acctacttcaccgatgcgggcgggcgcaccacccgcaagcaccgtttcgagggcatcctg
ccgaacctggaacgccgctaccgcgaaaccgaatcgccggccgtgcgcgaagagctgacc
aagtacgtcagccagcagccctgcccggcctgtaacggcacgcgtctgaaccgtgccgcg
cgcaacgtgttcgtcgccgaccgcccgctgcccgaactggtggtgctgccggtcaacgag
gcgctgagctttttccgcggcttgtcgctgccgggctggcgtggcgagatcgccagcaag
atcgtcaaggagatcggcgaacggctgggcttcctggtcgacgtgggcctggattacctg
accctggaacgcaaggccgataccttgtccggtggcgaggcgcagcgtatccggctggcc
agccagatcggcgccggcctggtcggggtgatgtatgtgctggacgagccatcgatcggc
ctgcatcagcgcgacaacgaacgcctgctcggcacgctgacgcggctgcgcgatctgggc
aataccgtgatcgtcgtcgagcatgacgaggacgcgatccgcctggccgattacgtgctg
gacatcggccccggcgccggcgtgcacggtggcgaaatctgcgcgcagggcacgctgcag
gacatcctggatgcacccggctcgctgaccggccagtacctgtcgggcaagcgccgcatc
gagattcccaagcagcgccacaagcccaacccgaagatgatgctgcatctgcgcggggcg
accggcaacaacctgaagaatgtcgacctggatattccggccggcctgttgacctgcatc
accggcgtgtccggctcgggcaagtccacgctgatcaacgacaccttgttctcgctggcg
gccaacgagatcaacggcgcctcgcatccggtggccgcgcatcgcgaggtggagaatctg
gatctgttcgacaaggtcgtggatatcgaccagtcgccgatcgggcgcacgccgcgctcc
aatccagccacctacaccggcatgttcaccccgttgcgcgagttgttcgcgcaggtgccg
gaagcgcgcgcgcgcggctattcgccgggccgtttcagcttcaacgtgcgcggcggccgc
tgcgaggcctgccagggcgatggcctgatcaaggtggagatgcacttcctgcccgacgtc
tacgtgccctgcgatgtctgccacggcaagcgctacaaccgcgagacgctggagatccgc
tacaagggtttcaacatcagcgacgtgctgcagatgaccgtcgaggacgcgctgcggctg
ttcgagccggtgccgtcgatcgcacgcaagctggaaacgctggtggatgtgggcctgagt
tacatcaagctgggccagagcgcgaccacgctgtccggcggtgaggcgcagcgcgtcaag
ttgtccaaggagctgtcgcgtcgcgataccggacgcaccctgtacatcctcgatgagccg
accaccggcctgcacttccacgacatcgaagcgctgctcggcgtgctgcacaagctgcgc
gacgagggcaacacggtggtggtgatcgaacacaatctggacgtgatcaagaccgccgac
tggatcgtggatttgggcccggaaggtggccatcgcggcggcagcatcctggtctccggc
acgccggaagatgtggccgcgcacaaggcgtcctacaccgggcagttcctggccaagatg
ctgccgtcggtgaaggcgcgcgagacccggccggcggcgatggccaacaagccggatgcg
cgcccgccacgcaagatcaaaccggagaaggtggcgaaagtcgccaagtccgccaccaag
aaaaccgcaaagaagaaggcaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (24)   

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