KEGG   Xanthomonas arboricola: XB05_16895
Entry
XB05_16895        CDS       T06096                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
xar  Xanthomonas arboricola
Brite
KEGG Orthology (KO) [BR:xar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xar03032]
    XB05_16895
   03400 DNA repair and recombination proteins [BR:xar03400]
    XB05_16895
Enzymes [BR:xar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     XB05_16895
DNA replication proteins [BR:xar03032]
 Prokaryotic type
  DNA Topoisomerases
   XB05_16895
DNA repair and recombination proteins [BR:xar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      XB05_16895
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AKC80241
UniProt: A0A0E3UFK2
Position
4031354..4032541
AA seq 395 aa
MKAKRVLRNAAATASAAGKLATVAAGAVAATAAVASVAAVAQAKATARAAGLTYVNDQQP
GISRRKAGKSFSYRSADGQRVADADTLQRIRALAIPPAYTEVWICAKPNGHLQATGRDAR
RRKQYRYHADWAQVRGEGKFERVIAFGQALPKLRRRLRRDLVLPGFPREKVLAIVVALLA
DTLVRVGSAEYARSNRSYGLTTLRNRHMEFLRGGRARLKFRGKSGQDHDIEVDDKQLVKL
IRECQQLPGQSLFQYRDDDGQLQPVDSGEVNDYLREAMGEDFTAKDFRTWGGTLAALQRL
ARLPLPERMSERALTQVQNDVIREVADALGNTPSVCRKAYIDPCVFEGWRAGHLQAMATG
VRGERQWEAATLKFLSASRNKPKARARPASKRKSA
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgaaagccaaacgtgttcttcgcaatgccgccgccaccgccagcgcggccggcaagctg
gccaccgttgccgccggcgcggtggccgccaccgccgcggtggcgagcgtggccgcggtt
gcacaggccaaggccaccgcgcgcgcggccgggctcacctacgtcaacgatcagcagccc
ggcatcagccgccgcaaggccggcaagagcttcagttaccgcagcgcggatggacaacgc
gtggccgatgccgacaccttgcagcgcatccgcgcgctggcgattccgccggcgtatacc
gaggtgtggatctgcgccaagcccaacggccatctgcaggccaccggccgcgatgcgcgc
aggcgcaagcaataccgctaccacgccgattgggcgcaggtgcgcggcgaaggcaagttc
gaacgggtgatcgccttcggccaggcgctgcccaagctgcgccgacggctgcgccgcgat
ctggtcctgccgggatttccgcgcgagaaggtgctggcgatcgtggtggcgttgctggcc
gacacgctggtgcgcgtaggcagcgccgaatatgcgcgcagcaatcgttcctacgggctg
accacgttgcgcaaccggcacatggaattcctgcgcggcggacgtgcgcggctgaagttc
cgcggcaagagcggccaggatcacgatatcgaggtggacgacaagcaactggtcaaactg
atccgcgaatgccagcaattgcctgggcaatcgctgttccagtaccgcgatgacgacggc
cagctgcagccggtggattcaggcgaggtcaacgactacctgcgcgaggcgatgggcgag
gatttcaccgccaaggatttccgcacctggggcggcacgctggcggcattgcaacgtctg
gcacgtttgccgctgcccgagcgcatgagcgagcgcgcgctgacccaggtgcagaacgat
gtcatccgcgaagtggccgatgcgctgggcaatacaccctcggtgtgtcgcaaggcgtat
atcgacccgtgcgtgttcgaaggctggcgcgccggtcacttgcaggccatggccaccggc
gtgcgcggcgagcgccaatgggaggcggccacgctgaagttcttgagcgcttcgcgtaac
aagcccaaggcacgggcaaggcctgcatcaaagcggaagtccgcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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