KEGG   Xanthobacter autotrophicus: Xaut_0068
Entry
Xaut_0068         CDS       T00581                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
xau  Xanthobacter autotrophicus
Brite
KEGG Orthology (KO) [BR:xau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xau03016]
    Xaut_0068
Enzymes [BR:xau01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Xaut_0068
Transfer RNA biogenesis [BR:xau03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Xaut_0068
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ABS65327
UniProt: A7IBD4
Position
complement(73947..74567)
AA seq 206 aa
MTIRLHRGDLPADFVAAPVVAIDTETMGLNPFRDRLCLVQLSNGDGSADLVQIPQGADAT
TAPNLTRLLADPAITKLFHFGRFDIAVLQHTFHVMPQPVWCTKIASRLVRTYTDRHGLKD
LLRETINVDISKQQQSSDWGAKDLSDAQLAYAASDVLHLHAVKAKLEEMLARENRTGLAA
ACFAFLPARAALDLSGWAEEDIFAHS
NT seq 621 nt   +upstreamnt  +downstreamnt
atgaccatccgcctgcatcgcggcgacctgcccgcggacttcgtcgccgcgcccgtggtg
gcgatcgacaccgagaccatggggctcaaccccttccgcgaccggctttgcctggtccag
ctgtccaacggcgacggaagcgccgacctggtgcagatcccgcagggcgccgacgccacc
accgcgccgaacctcacgcgccttttggccgatcccgccatcaccaagctgttccatttc
ggacggttcgatatcgcggtgctccagcacaccttccatgtgatgccgcagccggtgtgg
tgcaccaagatcgcctcgcggctggtgcgcacctacaccgaccgccacgggctgaaggac
ctgctgcgcgagaccatcaacgtggacatctccaagcagcagcagagctccgattggggc
gccaaggacctctccgacgcccagctcgcctatgccgcttccgacgtgctgcacctgcat
gcggtgaaggccaagctggaggagatgctggcgcgggagaaccgcaccgggctcgccgcc
gcctgcttcgccttcctgccggcgcgggcggccctcgacctctcgggctgggcggaagag
gacatcttcgcccactcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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