KEGG   Xanthobacter autotrophicus: Xaut_1810
Entry
Xaut_1810         CDS       T00581                                 
Name
(GenBank) RNA modification enzyme, MiaB family
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
xau  Xanthobacter autotrophicus
Brite
KEGG Orthology (KO) [BR:xau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xau03016]
    Xaut_1810
Enzymes [BR:xau01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     Xaut_1810
Transfer RNA biogenesis [BR:xau03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    Xaut_1810
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM B12-binding
Other DBs
NCBI-ProteinID: ABS67055
UniProt: A7IGB2
Position
2037848..2039338
AA seq 496 aa
MKGATRAGVTIASRPRAMIDGDRTGNMHEPRKLYVKSFGCQMNVYDSHRMADTLAREGFV
ETQDPAEADLVILNTCHIREKAAEKVYSELGRLRKQKQEAGSDTMIAVAGCVAQAEGAEI
MRRAPVVDLVVGPQSYHRLPELLAEAKAGKRVVDTEFPAEDKFDHLPAPTRAATRSRGPA
AFVTVQEGCDKFCTFCVVPYTRGAEVSRPVAKIMDEAARLVDQGVREISLIGQNVNAFHG
AGPDGTTWSLARLMEHMARLDGLARLRYTTSHPRDMDDDLIAAHRDLPQLMPYLHLPVQS
GSDRILAAMNRKHGRDDFFAIIEKMRQARPDMALSSDFIVGFPGESEKDFEDTLDLVRRV
GFASAYSFKYSPRPGTPAADHDAQVPEEVKAERLAELQRLLEASKAAFDESCRGRTFDIL
LEKPGRQAGQLIGRSPYLQSVVVNDPPAAIGDLLTVTITDVGPNSLAGVPAEASEPSVSQ
SPVSSARSRPLAAMEA
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgaagggggcgacaagagctggcgtcacgatcgcgtcgcgcccacgcgcgatgatcgac
ggcgacagaacaggcaacatgcacgagccccgcaagctttatgtgaagtcattcggctgc
cagatgaacgtctacgattcccatcgtatggcggacacgctggcacgcgagggcttcgtg
gagacgcaggacccggccgaggccgatcttgtcatcctgaacacctgccatatccgcgag
aaggccgccgagaaggtctattcggagctgggacgcctgcgcaaacagaagcaggaagcc
ggttccgacaccatgatcgcggtggccggctgcgttgcccaggccgaaggcgccgagatc
atgcgccgcgcgccggtggtggacctcgtggtcggcccccagagctaccaccgcctgccc
gagcttctggccgaggccaaggctggcaagcgggtggtggacaccgaatttcccgccgag
gacaagttcgaccacctgcccgccccgacgcgggcggccacacgttcacgcgggccggcg
gccttcgtcaccgtgcaggaaggctgcgacaagttctgcaccttctgcgtggtgccctat
acccgcggcgccgaagtctcccgcccggtcgcgaagatcatggacgaggcggcgcggctg
gtggaccagggggtccgcgagatcagcctcatcggccagaacgtcaacgccttccatggc
gcgggaccggacggcacgacctggagcctcgcccgactcatggagcacatggcgcgcctc
gatggccttgcccggctgcgctacaccacctcccatccccgcgacatggacgacgacctc
atcgccgctcaccgcgacctgccgcagctgatgccctacctgcacctgccggtgcagtcg
ggctccgaccgcatcctcgccgccatgaaccgcaagcacggccgggacgacttcttcgcc
atcatcgagaagatgcggcaggcgcggccggacatggccctgtcgtccgacttcatcgtc
ggcttccccggcgagagcgagaaggatttcgaggacaccctcgacctggtgcgccgggtg
ggcttcgccagcgcctattcgttcaagtacagcccccggcccggtacgcctgcggccgat
catgacgcgcaggtgccggaggaggtgaaggccgagcgcctcgccgagcttcagcggctg
ctggaagcctccaaggccgcctttgacgagagctgccgcggccgcaccttcgatatcctg
ctggagaagcccggccgccaggccggccagctcatcggccgctcgccctatctgcaaagc
gtggtggtgaacgatccgcccgccgccatcggcgacctcctcaccgtgaccatcaccgat
gtggggcccaacagcctcgcgggcgtgcccgccgaggcgagcgaaccttccgtttcccag
tccccagtgtcttccgcccgatcccggccgcttgcggccatggaggcttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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