KEGG   Xanthobacter autotrophicus: Xaut_2219
Entry
Xaut_2219         CDS       T00581                                 
Name
(GenBank) integration host factor, beta subunit
  KO
K05788  integration host factor subunit beta
Organism
xau  Xanthobacter autotrophicus
Brite
KEGG Orthology (KO) [BR:xau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xau03032]
    Xaut_2219
   03036 Chromosome and associated proteins [BR:xau03036]
    Xaut_2219
   03400 DNA repair and recombination proteins [BR:xau03400]
    Xaut_2219
DNA replication proteins [BR:xau03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Xaut_2219
Chromosome and associated proteins [BR:xau03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    Xaut_2219
DNA repair and recombination proteins [BR:xau03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      Xaut_2219
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-CCDC81_bac_2 Synaptobrevin HU-CCDC81_bac_1 CATASP
Other DBs
NCBI-ProteinID: ABS67463
UniProt: A7IHH0
Position
complement(2480268..2480552)
AA seq 94 aa
MIKSELVQKIAEANPHLYQRDVENIVNAILEQVASALERGDRVELRGFGAFSVKKRDARV
GRNPRTGKQVDVSEKTVPYFKTGKEMRERLNTGK
NT seq 285 nt   +upstreamnt  +downstreamnt
atgatcaagtccgaactcgtccagaagatcgccgaggccaacccgcacctctaccagcgg
gacgtggagaacatcgtcaacgccatcctggagcaggtggcctccgctctcgagcgtggc
gaccgggtggaactgcgcggctttggcgccttctcggtgaagaagcgcgacgcccgcgtc
ggccgcaacccgcgcaccggcaagcaggtggacgtgagcgagaagaccgtcccttacttc
aagaccggaaaagagatgcgcgaacgtctcaacaccggaaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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