KEGG   Xenorhabdus bovienii SS-2004: XBJ1_3154
Entry
XBJ1_3154         CDS       T01186                                 
Symbol
rpoE
Name
(GenBank) sigma E (sigma 24) factor of RNA polymerase, response to periplasmic stress (TetR/ArcR family)
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
xbo  Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:xbo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xbo03021]
    XBJ1_3154 (rpoE)
Transcription machinery [BR:xbo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     XBJ1_3154 (rpoE)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23
Other DBs
NCBI-ProteinID: CBJ82276
UniProt: D3V3P7
Position
complement(3092411..3092986)
AA seq 191 aa
MSEQLTDQMLVERVQKGDQKAFNLLVIKYQHKVASLVARYVPQGDVPDVAQEVFIKTYRA
LYSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSNDLDANDAENYDASSSLKEISNPEN
LMLSEELKEVVFRTIESLPDDLRVAITLRELDGLSYEEIAEIMECPVGTVRSRIFRAREA
IDNKVKPLIQQ
NT seq 576 nt   +upstreamnt  +downstreamnt
atgagcgagcagttaacggatcaaatgctggtcgaacgggtacaaaagggcgaccagaaa
gcatttaatttgctggttataaaatatcagcacaaagtggcgagcctggttgctcgttac
gtacctcaaggcgacgttcctgatgtcgctcaagaggtgtttattaagacttatcgtgcg
ctttattctttccggggtgatagtgctttttatacgtggttgtaccgtattgccgttaat
actgcgaaaaactatttagttgctcagggacgtcgcccaccatccaatgacttggatgcc
aacgatgcagaaaattatgatgcgtcaagttcattaaaagaaatttcgaaccctgagaac
ttaatgttgtctgaagaactaaaggaagtggttttccgtaccatcgaatcgctcccagat
gatttgcgggtagcgattacgctcagggagttggatgggttgagctatgaagaaatagct
gagatcatggagtgtcctgtcgggactgtccgttcacgaatcttccgggcaagggaagcc
attgataataaagtcaaaccactgatccaacagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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