KEGG   Xenorhabdus bovienii SS-2004: XBJ1_3197
Entry
XBJ1_3197         CDS       T01186                                 
Symbol
miaB
Name
(GenBank) involved in methylthiolation of isopentenylated A37 derivatives in tRNA, Fe-S protein
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
xbo  Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:xbo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xbo03016]
    XBJ1_3197 (miaB)
Enzymes [BR:xbo01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     XBJ1_3197 (miaB)
Transfer RNA biogenesis [BR:xbo03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    XBJ1_3197 (miaB)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2 B12-binding Amdase
Other DBs
NCBI-ProteinID: CBJ82318
UniProt: D3V3T9
Position
3124356..3125786
AA seq 476 aa
MSTIKKLYIKTWGCQMNEYDSSKMADLLETTHGYQLTDVAEEADILLLNTCSIREKAQEK
VFHQLGRWKGLKDKNPEIIIGVGGCVASQEGDFIRQRAPSVDIIFGPQTLHRLPEMINHV
KGTHSPIVDISFPEIEKFDRMPEPRAEGPSAFVSIMEGCNKYCTFCVVPYTRGEEVSRPC
DDILFEIAQLAAQGVRDVNLLGQNVNAYRGAAFDGDICTFAELLRLVAAIDGIDRIRFTT
SHPIEFTDDIIAVYEDTPELVSYLHLPVQSGSDRILTQMKRAHTALEYKGIIRRLRKARP
DILISSDFIIGFPGETQDDFEKTMQLIADVNFDMSFSFIYSARPGTPAADLPDDVSEEEK
KQRLYLLQQRINQQAMSFSRAMVGSTQRILVEGTSRKNIMELSGRTENNRVVNFEGTPDM
IGKFVDAEIVDVYANSLRGKVIRTEDEMNLRIHESPESVIARTRKEDEIGVGIYQP
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtcgacgataaaaaaactgtatatcaaaacctggggctgtcagatgaacgaatatgat
tcatccaagatggccgacttactggaaaccactcacggttatcagttaaccgatgtcgcc
gaagaagcagatatcttactcctgaacacctgttcaatccgtgaaaaagcccaagaaaaa
gtcttccatcagctcgggcgctggaagggtttaaaagacaaaaatcccgaaattattatt
ggtgtcggtggctgtgttgcatctcaggaaggggatttcatccgccaacgcgctcctagc
gttgatattatcttcgggcctcaaaccctgcatcgcctgcctgaaatgattaatcatgtg
aaaggcacccacagtccaatagttgatatcagcttccctgagatcgaaaaattcgaccga
atgccagaacctcgggcagaaggcccgagcgcattcgtctccattatggaaggctgcaat
aagtactgtacattctgcgtcgttccttacacccgaggagaagaagtcagccgtccttgt
gatgatattttgtttgaaattgcccagcttgctgctcaaggcgtacgtgacgttaacctg
ctcggtcagaacgttaacgcttaccgaggcgcagcattcgacggggatatctgcacattt
gcggaattactgcgtctggtcgcggccattgatggtattgaccgcattcgcttcaccacc
agccatcctattgaatttaccgatgatattatcgcggtttacgaagacacaccggagtta
gtcagctatctgcacctacccgtacagagtggctctgaccgtatcctgacccagatgaaa
cgtgcacataccgcactggaatacaaagggatcatccgccgtctgcgcaaagcacgtcct
gacattctgatcagttctgacttcatcatcggtttccctggtgaaacacaggatgacttc
gaaaaaaccatgcaactgattgccgatgtgaatttcgacatgagtttcagcttcatctat
tcagcgcgtccgggaacccctgcggccgatttgccggatgacgtgagtgaagaagaaaaa
aaacagcgcctgtatctgctccagcagcgtatcaatcagcaggccatgagcttcagccgc
gcaatggttggcagtacacagcgtattctggttgaaggcacatcccgcaaaaatatcatg
gagctttccggccgtactgaaaataaccgcgtggttaattttgaaggaacgcctgacatg
attggcaagttcgttgatgccgaaattgttgacgtgtatgccaactccctgcgcggtaaa
gttatccgtacagaagatgagatgaatttgcgcatccatgagtcacctgagtcagtcatc
gcccgtacccgcaaggaagatgaaatcggcgttggcatttatcagccttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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