KEGG   Xenorhabdus bovienii SS-2004: XBJ1_3474Help
Entry
XBJ1_3474         CDS       T01186                                 

Gene name
ddlB
Definition
(GenBank) D-alanine-D-alanine ligase B, affects cell division
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
xbo  Xenorhabdus bovienii SS-2004
Pathway
xbo00473  D-Alanine metabolism
xbo00550  Peptidoglycan biosynthesis
xbo01100  Metabolic pathways
xbo01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:xbo00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    XBJ1_3474 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    XBJ1_3474 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    XBJ1_3474 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:xbo01011]
    XBJ1_3474 (ddlB)
Enzymes [BR:xbo01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     XBJ1_3474 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:xbo01011]
 Precursor biosynthesis
  Amino acid ligase
   XBJ1_3474 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp_3 ATP-grasp ATPgrasp_ST ATPgrasp_Ter RimK TTL
Motif
Other DBs
NCBI-ProteinID: CBJ82592
UniProt: D3V4L3
Position
complement(3382892..3383812)
Genome map
AA seq 306 aa AA seqDB search
MVEKVAVLLGGTSAEREVSLQSGQSVVAGLKEAGINAYSVDTKDFDVTKLKGEGFSKAFI
ALHGRGGEDGTLQGVLEFLQIPYTGSGVMASALSMDKLRTKQLWQGAKLPVSPYAAINAQ
KFEQVNDFQLQEYVRELGLPLMVKPNLEGSSVGMTKVNDYSELRGALELAFQHDTDVLVE
KWLLGPEYTVAFLGDEVLPSIRIQAPEVFYDYDAKYLSNETKYFCPSGLSAEKELELAEI
ASKAYKALGCSGWGRVDIMDDGNGNFYLLEVNTSPGMTSHSLVPMAARQSGLSFSQLVVK
ILELAD
NT seq 921 nt NT seq  +upstreamnt  +downstreamnt
atggttgagaaggtcgctgttctattgggcggaacctccgctgagcgggaagtttcactg
caatcaggacaatctgttgtggccgggctgaaagaagcaggcattaatgcatattcagtc
gatacaaaagactttgatgtgactaaactcaaaggagaaggattcagcaaagccttcatc
gctctgcatgggcgtggtggtgaagatggtacgctgcaaggggtactggagtttttgcaa
atcccttataccggcagtggtgttatggcatcagctttgtcaatggacaaattgcgcaca
aaacagttatggcagggagcaaagttgccggtttctccgtatgccgcaattaatgctcaa
aaatttgaacaagttaatgatttccaactccaagaatatgttcgagaattaggacttcca
ttaatggttaagccgaatctggaaggttccagtgttggtatgactaaagtgaatgattat
tccgaactgcgtggggcattggagctggcgttccagcacgacacggatgtgctggttgaa
aaatggttgttgggtcctgaatataccgtggcatttttgggcgatgaggttttaccctct
atccgtatccaagctccggaagtgttctatgactacgatgcgaaatatctttccaatgaa
acgaaatacttctgcccaagtggcctgagtgcagaaaaagagctggagttggcagagatt
gcatcaaaagcgtataaggcgctgggatgcagtggttggggtcgggttgatatcatggat
gatggcaatggtaatttctatctgttggaagtgaatacatccccaggtatgaccagccat
agcttagtaccgatggccgcacgtcagtccggactcagtttttcacagctggtggtgaaa
attctggagttggccgattga

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