KEGG   Xanthomonas campestris pv. campestris B100: xcc-b100_3036
Entry
xcc-b100_3036     CDS       T00759                                 
Name
(GenBank) RNA polymerase ECF-type sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
xca  Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:xca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xca03021]
    xcc-b100_3036
Transcription machinery [BR:xca03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     xcc-b100_3036
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 Phage_antitermQ HTH_38 HTH_40 HTH_20 HTH_28
Other DBs
NCBI-ProteinID: CAP52399
UniProt: B0RX33
Position
complement(3465837..3466457)
AA seq 206 aa
MAEVDTPQELDLELVRRVQRGESAAFDVLVRKYQHRIVALIGRYIADWSECQDVAQDTFV
RAYRAINSFRGDAQFYTWLHRIAVNTAKNHLVAHNRRPPTDDIDVSDAEQFDGATRLRDT
DTPERELMRQELEQTVMRAVQALPEELRSAITLREVEGLSYEEIARKMDCPIGTVRSRIF
RAREAIDIELRPLLETESATRERHRV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggccgaagtcgatacacctcaggagctggatctggaactggtccggcgtgtgcagcgc
ggcgagagcgcggcgttcgatgtgttggtgcgcaagtaccagcaccggatcgtcgccctg
atcgggcgctacatcgccgactggagcgaatgccaggacgtggcccaggatacgtttgtg
cgcgcttaccgcgcgatcaacagttttcgtggcgacgcccagttctatacgtggctgcac
cgcattgccgtgaacactgccaagaaccacctggttgcgcacaatcgccgcccgcccacc
gatgacatcgacgtcagcgacgccgaacaattcgatggtgcgacccgcttgcgcgacacc
gacaccccggagcgcgaattgatgcgacaggagctggaacaaacggtgatgcgtgcggtc
caagccttgccggaagaactccggtcggccatcaccctgcgcgaggtggaagggctgagt
tacgaggagatcgcgcgaaagatggattgcccgatcggaacggtgcgctcgcgcatcttc
cgggcgcgcgaggccatcgacatcgagctacggcctctgctggagaccgaaagcgctacc
cgtgagcgacaccgtgtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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