KEGG   Xanthomonas campestris pv. campestris 8004: XC_1656
Entry
XC_1656           CDS       T00247                                 
Name
(GenBank) integration host factor alpha chain
  KO
K04764  integration host factor subunit alpha
Organism
xcb  Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:xcb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xcb03032]
    XC_1656
   03036 Chromosome and associated proteins [BR:xcb03036]
    XC_1656
   03400 DNA repair and recombination proteins [BR:xcb03400]
    XC_1656
DNA replication proteins [BR:xcb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    XC_1656
Chromosome and associated proteins [BR:xcb03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    XC_1656
DNA repair and recombination proteins [BR:xcb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      XC_1656
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 DUF2267 Barstar
Other DBs
NCBI-ProteinID: AAY48722
UniProt: Q4UW51
Position
1992475..1992774
AA seq 99 aa
MALTKAEMAERLFDEVGLNKREAKEFVDAFFDVLRDALEQGRQVKLSGFGNFDLRRKNQR
PGRNPKTGEEIPISARTVVTFRPGQKLKERVEAYAGSGQ
NT seq 300 nt   +upstreamnt  +downstreamnt
atggcattgacgaaagcggagatggccgagcgtctgttcgacgaagtcggcctgaacaag
cgtgaggcgaaggaattcgtcgacgcgtttttcgatgtgctgcgcgatgcactggagcag
ggccgtcaggtgaagttgtcgggcttcggcaacttcgatctgcggcgcaagaaccaacgg
cccggtcgcaatcccaagaccggtgaggaaattccgatctcggccaggacggtggtgacc
ttccgccccggccagaaactcaaggaacgggtggaggcttatgctggatccgggcagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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