KEGG   Xanthomonas campestris pv. campestris 8004: XC_2343
Entry
XC_2343           CDS       T00247                                 
Name
(GenBank) putative single stranded DNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xcb  Xanthomonas campestris pv. campestris 8004
Pathway
xcb03410  Base excision repair
xcb03430  Mismatch repair
xcb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    XC_2343
   03430 Mismatch repair
    XC_2343
   03440 Homologous recombination
    XC_2343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcb03400]
    XC_2343
DNA repair and recombination proteins [BR:xcb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     XC_2343
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     XC_2343
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      XC_2343
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: AAY49396
UniProt: A0A0H2X812
Position
complement(2832536..2834284)
AA seq 582 aa
MTSSPTIVRRPPGQGGTWPDAMLPLLRRIYAARGVVDVHGAHPRLGQLLSPELLHNSRVA
AELLADAIAAQRRILVVGDFDCDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGLSPA
LVDELAALQPDLLVTVDHGIACHAGVAAAKARGWTVLVTDHHLPGEVLPPADAIVDPNLV
QDSFPSKTLAGVGVIFYVLLALRGVLRARGAFAERAEPDLSVLLDLVAVGTVADLVPLDT
NNRALVSAGLRRLRDGKGCIGLRALIDASGRDAARLSASDIGFALAPRLNAAGRLEDMAL
GIELLLCEDWSRAREIAGLLEEINAERRAVQQLMTDDAEQAVTKVMLAADGALPMAACLF
DPEWHPGVIGLVASKLKDRLHRPVIALAPAEPGSDQLRGSARSIPGLHIRDVLAAVDARH
PGLIQKFGGHAMAAGLSLEHRALAAFEQAFQTQVQAMVDASLLQAELHSDGELAAHELDH
LHAEALRAAGPWGQGFPEPLFDGQFEVLQWRLLKERHLKLTLRCAGRAGRAEPLNAIHFN
GWRGSEPARTVRIAYRLVGDDYRGGTAVQLIVEHCEPAASAG
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgacctccagccccacgattgtgcgacgcccgccggggcagggcggcacctggcccgac
gcaatgctgccgttgttgcggcggatctacgccgcgcgcggcgtggtcgatgtgcacggc
gcgcacccgcggctcggccagctgttgtcgccggagttgttgcacaacagccgcgtcgcg
gccgaactgttggccgatgcgatcgccgcccaacggcgcatcctggtggtaggcgacttc
gattgcgatggcgctaccgcgtgcgcagtcggcgtgcgcggtctgcgcatgctgggtgcg
ctggatgtgcaccatgcggtgcccaaccgcatggtgcatggctatggtctgtcaccggcg
ctggtggacgaactggctgcactgcagccggatctgctggtcaccgtcgatcacggcatc
gcctgccatgccggtgttgcggcggccaaggcacgcggctggaccgtgctggtcacagat
caccatttgcccggcgaggtcttgccgccggccgatgcaatcgtggaccccaacctggtg
caggacagtttcccgagcaagacgttggccggggtcggggtgatcttctacgtgctgctg
gccttgcgtggcgtgttgcgcgcacgcggggcgtttgccgagcgggcagaaccggatctg
tccgtgctgctggatctggtggcggtgggcacggtggccgatctggtgccgctggacacc
aataaccgcgcactggtgtcggcgggcctgcgccgcctgcgtgacggcaaaggctgtatc
ggcctgcgtgcgttgatcgacgccagtggccgcgatgcggcgcggctgagtgccagcgat
atcgggtttgcgttggcgccacgtctcaacgccgccggccggctcgaagacatggcactg
ggcatcgaactgttgctgtgcgaggactggagccgggcgcgcgagatcgccggcctgctg
gaagaaatcaacgccgagcgtcgtgcggtccagcagttgatgaccgacgatgccgagcag
gccgtcaccaaggtgatgctggctgccgatggcgcgctgccgatggcggcctgcctgttc
gaccctgaatggcaccctggcgtgatcggcctggtcgcctccaagctcaaggaccgcctg
caccgtccggtgatcgcgctggcaccggccgagccgggcagcgaccagttgcgtggctcg
gcgcgctccattcccggcctgcatatccgcgacgtgctggcggcggtggatgcgcgccat
ccggggctgatccagaagttcggcgggcatgcgatggcggccggcctgagcctggagcac
cgcgcgttggccgcgttcgagcaggcgtttcagacccaggtgcaggcgatggtcgatgcc
tcgctgttgcaggccgaattgcacagcgatggcgagctggccgcgcacgaactcgatcat
ctgcatgccgaagcgctgcgtgccgccgggccgtgggggcagggctttcccgaaccgctg
ttcgatgggcaattcgaggtgctgcaatggcgcctgctcaaggagcgccacctcaagctg
accttgcgctgcgccgggcgcgccgggcgcgccgagccgctcaacgccatccacttcaat
ggctggcgcggcagcgagccggcgcgcacggtgcgcatcgcctatcgactggtcggcgac
gactaccgcggtggcactgcggtacagctcatcgtcgagcactgcgagccggcggcgtca
gcgggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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