KEGG   Xanthomonas campestris pv. campestris 8004: XC_3590
Entry
XC_3590           CDS       T00247                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
xcb  Xanthomonas campestris pv. campestris 8004
Pathway
xcb00040  Pentose and glucuronate interconversions
xcb01100  Metabolic pathways
xcb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:xcb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    XC_3590
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XC_3590
Enzymes [BR:xcb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     XC_3590
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: AAY50632
UniProt: A0A0H2XCL8
Position
complement(4269391..4270608)
AA seq 405 aa
MQCCHGERVAHATCHCITHSREFNTMSTASTVVGRTVVGVVLGAALLSGTAYAADPALEV
ATTGWATQNGGTKGGSKAAAADIYTVTNAAQLKAALKAKAGSNGRIIKIKGVIDISEGKA
YTKTSDMKSRGRLDVPTKTSLIGVGTNAEIREGFFYVKANDVIVRNLTIENPWDPEPVWD
ADDGDAGNWNSEYDGLTVEGASNVWVDHVTFTDGRRTDDQNGTANGRPKQHHDGAMDVKK
GANYVTISYSVFKSHEKNSLIGSSDSASSTDSGKLKVTIHNTLFQDIAARAPRVRFGQVH
LYNNYHLGSTSNKVYPFSHAHGVGKESKIFSENNAFDISGVSSCTKIAGDYKGSVYRDQG
SLINGKALTCSWNSNIGWKPPYTYNILPANKVAADVKAKAGAGKL
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgcagtgctgtcacggggagcgcgtcgcgcatgcgacgtgtcattgcatcactcattca
agagaattcaacaccatgtcgactgcatcgacagttgtgggtcgtacggttgtgggcgtc
gttctgggcgctgcgttgttgtcgggcaccgcgtatgcggcagaccctgcactggaagtg
gccaccaccggctgggccacccagaacggcggcaccaagggaggctccaaggcggcggcg
gcagacatttacaccgtcaccaacgcggcccagctcaaggcggccttgaaggccaaggcc
ggcagcaacggccgcatcatcaagatcaagggtgtcatcgacatcagcgaaggcaaggcc
tacaccaagacctcggacatgaagagccgtggtcgcctggatgtgccgaccaagaccagc
ctgatcggcgtcggcaccaatgccgaaatccgcgaaggctttttctacgtcaaggccaac
gacgtcattgtgcgcaatctcaccatcgagaatccgtgggatccggagccggtgtgggat
gccgacgacggcgatgcaggcaactggaactccgaatacgacgggttgaccgtggaaggc
gccagcaacgtgtgggtggaccatgtgaccttcaccgacggccgccgcaccgatgatcag
aacggcaccgccaacggccgccccaagcagcatcacgatggtgcgatggacgtcaagaag
ggcgccaactacgtgaccatttcgtattcggtgttcaagtcgcacgagaagaacagcctg
atcggctccagcgacagtgcatcgagcaccgactccggcaagctcaaggtcaccatccac
aacaccttgttccaggacattgccgcacgtgcgccgcgcgtacgcttcggccaggtgcat
ctgtacaacaactaccacctcggcagcaccagcaataaggtgtacccgttctcgcatgcg
catggcgtgggcaaggaatcgaagatcttctccgagaacaatgccttcgacatcagcggc
gtgagcagctgcaccaagattgctggcgactacaagggcagcgtgtaccgtgaccagggc
tcgttgatcaacggcaaggcactgacctgcagctggaacagcaacatcggctggaagccg
ccgtatacctacaacatcctgccggccaacaaggtggcagcggacgtcaaggccaaggct
ggcgccggcaagctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system