KEGG   Xanthomonas campestris pv. campestris ATCC 33913: XCC2193
Entry
XCC2193           CDS       T00083                                 
Symbol
ihfB
Name
(GenBank) integration host factor beta subunit
  KO
K05788  integration host factor subunit beta
Organism
xcc  Xanthomonas campestris pv. campestris ATCC 33913
Brite
KEGG Orthology (KO) [BR:xcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xcc03032]
    XCC2193 (ihfB)
   03036 Chromosome and associated proteins [BR:xcc03036]
    XCC2193 (ihfB)
   03400 DNA repair and recombination proteins [BR:xcc03400]
    XCC2193 (ihfB)
DNA replication proteins [BR:xcc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    XCC2193 (ihfB)
Chromosome and associated proteins [BR:xcc03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    XCC2193 (ihfB)
DNA repair and recombination proteins [BR:xcc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      XCC2193 (ihfB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG CDC48_2 PTS-HPr HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AAM41473
UniProt: Q8P8P6
Position
complement(2586134..2586445)
AA seq 103 aa
MTKSELIEILARRQAHLKSDDVDLAVKSLLEMMGQALSDGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVVPVDMVDAAD
NT seq 312 nt   +upstreamnt  +downstreamnt
atgaccaagtccgaattgatcgaaatcctggcgcgacgccaagcgcatctgaagtcggac
gatgtggatctggcggtcaaatcgctgcttgaaatgatggggcaggccttgtccgatggt
gatcggatcgaaatccgtgggtttggcagcttctcgctgcattaccgcccgccacgcctg
ggccgcaacccgaagaccggtgaatcggtcgcgctgcctggcaagcatgttccgcatttc
aaacccggcaaggagctgcgcgagcgcgtgagctcggtggtgccggtcgacatggtggat
gcagcggactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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