KEGG   Xanthomonas campestris pv. campestris ATCC 33913: XCC2802
Entry
XCC2802           CDS       T00083                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
xcc  Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc02020  Two-component system
xcc02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:xcc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    XCC2802 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    XCC2802 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xcc03021]
    XCC2802 (rpoN)
Transcription machinery [BR:xcc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     XCC2802 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_Crp_2 HTH_AsnC-type HTH_IclR HTH_23 Sigma70_r4 HTH_11 Sigma70_r4_2 HTH_Tnp_ISL3 MarR HTH_36
Other DBs
NCBI-ProteinID: AAM42074
UniProt: Q8P712
Position
3307871..3309307
AA seq 478 aa
MKARLQTSLGQQLVMTPQLRQAIKLLQMSTTELEVEIAEAVETNPLLEWADEAAHAASEA
PVEPSPSASNEERQRDEPAPAERDDDWSQDELQWTGTGSGGSFDDDDNGDAAERVAESET
LADHLLWQLHLSPLSPRDRQIGAILIDALDEDGYLREPLSAILETLNLGNVDEAEVLTVL
HQIQRFDPVGIGARSLGECLALQLQVLDAATPARELALQIVAGPLERLPRSGIAGLAHEL
KRSAADVEQAVQLVRSLDPRPGKQISALSQDTYVVPDCVIWRQRGVWRAALAGRAQPKVT
IHRGYEQLIRSCGESDAGYLRGQLQEARWLLKSLEARGETLLRVVRCLLQHQAGFLEFGA
QALRPLTLREIAGELGLHESTISRAIARKYVRTPRGTIPLRSFFASGIDTDSGGEASSTA
IQAMIRRLIDAENPRKPLSDAKLADLLKTSGVPVARRTVAKYREAMNISASHERVRIA
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgaaagcccggctccagacatcgttaggacagcagttggtcatgacgccgcaattgcgt
caggcgatcaaactattgcagatgtccaccaccgagctggaagtggaaatcgccgaagcg
gtggagaccaatccactgctggagtgggccgacgaagccgcgcacgcggccagcgaggcg
ccggtcgaaccgtcgccctccgcctccaacgaagaacgccaacgcgacgagccggcgcct
gccgagcgcgacgacgactggtcgcaggacgagctgcaatggaccggcactggcagtggc
ggcagcttcgacgatgacgacaacggcgacgccgccgaacgcgtggccgagtccgaaacc
ctggccgaccacctgttgtggcagttgcacctgtcaccgctgtcgccaagggaccgccag
atcggcgcgatcctgatcgatgccctggacgaagacggctacctgcgcgagccgctcagc
gcgattctggagacgctcaacctcggcaacgtggacgaggccgaagtgctcaccgtgctg
caccagatccagcgcttcgacccggtgggcatcggcgcacgctcgctgggcgaatgtctg
gcgctgcagctgcaggtgctcgatgcggcgacgcctgcgcgcgagctggcgctgcagatc
gtggccgggccgctggagcggctgccgcgcagcggcattgccggcctggcccacgaactc
aagcgctctgccgccgatgtcgagcaggccgtgcagctggtgcgctcgctggacccgcgc
ccgggcaagcagatcagcgcgctgtcgcaggacacctatgtggtgccggactgtgtgatc
tggcgccagcgcggcgtctggcgcgccgccctggccggccgcgcgcaacccaaggtgacc
atccaccgcggctacgagcaactgatccgcagctgcggcgaatccgacgccggctacctg
cgtggccaactgcaggaagcgcgctggctgctcaagagcctggaggcgcgcggcgaaacc
ctgctgcgggtggtgcgctgcctgctgcagcaccaggccgggttcctggagttcggtgcg
caggcgctgcgcccgctgaccctgcgcgagatcgccggtgagttgggcctgcacgaatcg
acgatttcgcgtgccatcgcccgcaagtacgtacgcacgccgcgcggcaccatcccgctg
cgctcgttctttgcctccggcatcgacaccgacagcggcggcgaggcctccagcacggcg
atccaggcgatgatccggcgcctgatcgatgcggaaaacccgcgcaaacccttgtcggac
gccaagttggcagatctgttgaaaacttccggcgtaccagtagcgcgccgaaccgttgcg
aagtatcgtgaggccatgaacatttccgcctcccacgaacgcgtgcgcatcgcctga

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