KEGG   Xylanimonas cellulosilytica: Xcel_1891
Entry
Xcel_1891         CDS       T01135                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
xce  Xylanimonas cellulosilytica
Brite
KEGG Orthology (KO) [BR:xce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xce03016]
    Xcel_1891
Enzymes [BR:xce01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Xcel_1891
Transfer RNA biogenesis [BR:xce03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Xcel_1891
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC SAND
Other DBs
NCBI-ProteinID: ACZ30910
UniProt: D1BT68
Position
2033435..2034697
AA seq 420 aa
MTQPSQPTDVVPADVVPPADVAPVVVPLTEPSGGVPEVVDSPAGLAKVVAAFAGGRGPVA
ADCERASGYRYGQSTFLVQLRREGAGTALLDPVALPDLSAIGAAVGDVEWILHAASQDLP
GLAEHGLRPASVFDTELAARLLGLERVGLAAVVADTLGLGLAKEHSAVDWSTRPLPVDWL
RYAALDVEVLGEVRDVLAERLADAGKSEWAAQEFEAVRTAPPPPPRVDPWRRVSGTHTLR
DRRKLAVVRALWEARDASARARDVAPGRVLPDRAIVAAANALPRTAGQLITIGEFAGKGQ
RRRAATWQRAIDQAMALPETALPSLRGPASDGPPQPRLWADRDPEAARRLAAAREIVAAL
SEQHHLPVENLLQPDALRRVCWAPPAPATVDSVSDFLRGRGAREWQIGLVAGPLAGAFAA
NT seq 1263 nt   +upstreamnt  +downstreamnt
gtgacgcagccctcccagcccactgacgtcgtacccgccgacgtcgtgccccctgccgac
gtggcccccgtcgtcgtcccgctgaccgagccctccggcggcgtgcccgaggtggtcgac
tcccccgcaggccttgccaaggtggtggcggcgttcgccggcggcaggggcccggtggcc
gccgactgcgagcgcgcctccggctaccgctacggccagtcgacgttcctggtccagctg
cggcgcgagggcgccggcaccgcgctgctcgacccggtggccctgccggacctgtccgcg
atcggcgcggcggtgggcgacgtcgagtggatcctgcacgccgcgtcccaggacctgccc
gggctcgccgagcacggcctgaggccggcgtcggtgttcgacaccgagctcgccgcccgc
ctgctcgggctcgaacgagtgggcctggccgccgtcgtcgccgacacgctcgggctgggg
ctcgccaaggagcactcggccgtcgactggtccacgcggccgctgcccgtggactggctg
cggtacgcggcgctcgacgtcgaggtgctcggcgaggtgcgcgacgtgctcgccgagcgc
ctggccgacgcgggcaagagcgagtgggccgcccaggagttcgaggccgtgcgcaccgct
cccccgccgccgccgcgcgtcgacccgtggcggcgggtctcgggcacccacacgttgcgc
gaccgccgcaagctcgccgtcgtgcgcgcgctgtgggaggcgcgggacgcctccgcccgc
gcgcgggacgtcgcgcccgggcgggtactgccggaccgcgcgatcgtcgccgccgccaac
gcccttccccgcacggcggggcagctcatcaccatcggcgagttcgccggcaagggccag
cgccgtcgggcggccacctggcagcgcgccatcgaccaggccatggcgctgccggagacg
gcgctgccgagcctgcgcggaccggcgtcggacggacccccgcagccgcgcctgtgggcc
gaccgcgaccccgaggcggcccggcgcctggccgcggcgcgcgagatcgtcgcggcgctc
tcggagcagcaccacctgcccgtggagaacctgctgcagcccgacgccctgcgccgcgtg
tgctgggctcccccggcacccgccaccgtggactccgtctcagacttcctccgcgggcgg
ggcgcccgggagtggcagatcgggctcgtcgcgggcccgctcgcgggagcgttcgccgcc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system