KEGG   Xanthomonas citri pv. citri mf20: J172_00719
Entry
J172_00719        CDS       T03781                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
xcf  Xanthomonas citri pv. citri mf20
Pathway
xcf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    J172_00719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcf03400]
    J172_00719
Enzymes [BR:xcf01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     J172_00719
DNA repair and recombination proteins [BR:xcf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     J172_00719
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AJZ07318
UniProt: A0A0U4YGT0
Position
711545..712297
AA seq 250 aa
MPEGPSLVILREDTQAFVGRKIVRVSGNSKQDIARLDQQKVLALRSWGKHFLIEFAHFSV
RIHFLLFGSYRINEDKPNAVPRLCLEFSKGQRLNFYACSVQFIERPLDEIYDWTADVMNP
LWDAAQARRKLRAAPALLAADALLDQTIFAGVGNIIKNEVLHRIRVHPESTVGALPARKL
GELVTQARDYSFDFYTWKKAFVLKKHYQVHTKTRCPRDGAPLQYRKHLGKAGRRAFFCEV
CQRLYRADEA
NT seq 753 nt   +upstreamnt  +downstreamnt
atgccagaaggtccctcacttgtcatcctgcgcgaagacacccaagcgttcgtcggtcgc
aagatcgtgcgtgtgtccggcaacagcaagcaggacatcgcccgtctggaccagcaaaaa
gtgctggcactgcgcagctggggcaaacactttttgatcgaatttgcgcacttcagcgtg
cgcatccatttcctgctgttcggcagctaccgcatcaacgaagacaaacccaacgcggtg
ccgcgcttgtgcctggaattttccaaaggccagcggctgaatttctatgcgtgctcggta
cagttcatcgagcgtccgctggacgagatctacgactggacggcggacgtgatgaaccca
ctgtgggacgccgcgcaggcgcgccgcaaattacgcgccgctccggcactgctggcggcc
gatgcactgctcgaccagaccatctttgccggcgtgggcaacatcatcaagaacgaggtg
ctgcatcgtatccgcgtgcatccggaaagtaccgtgggcgcgctaccggcgcgcaagctg
ggcgaactggtcacccaggcacgcgactacagtttcgacttctacacctggaaaaaggcc
ttcgtgctgaagaagcattatcaggtgcacaccaagacccgttgcccgcgcgacggcgca
ccgctgcaataccgcaagcacttgggcaaggccgggcgtcgcgcgtttttctgcgaggta
tgccagcgcttgtaccgcgccgacgaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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