KEGG   Xanthomonas citri pv. citri mf20: J172_04288
Entry
J172_04288        CDS       T03781                                 
Name
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
xcf  Xanthomonas citri pv. citri mf20
Pathway
xcf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xcf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    J172_04288
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xcf02044]
    J172_04288
Secretion system [BR:xcf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   J172_04288
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C AAA_22 ABC_tran AAA_29 SIT
Other DBs
NCBI-ProteinID: AJZ10814
UniProt: A0A0U5FMK9
Position
complement(4833995..4837519)
AA seq 1174 aa
MKTLLSKLSATVVVGLLALCLLSVLLWVGGPYVALAGWSPLSSVAARLLAIVLLLVVWVG
VLALRRWRRQARAATLSSALAAPGRDDDRELRSGQERAQLQARFQQAIQLLRKRRGGADL
YTLPWYALIGPPGSGKSTLLQHSGLQFPLAARMGDAALRGVGGTRDCEWWFTDEAVFLDT
AGRYTTQDSDQAVDAGAWRDFLRLLRRYRPRRPLNGVLVTMSMSDLLLLDDAERDTHMQA
IRRRLDELAEQLQASVPVYLIFTKCDLIGGFGEFFDDLTPAQRNQVWGMTFALAQTLDGH
AARKFADEFGVLQQQLSARLFERLNLERDRLRCAAILSFPQQVAALGERARQFVEGTFAG
NAYGPAPLLRGVYFTSGTQDGTPIDRMMGAVARTFGLEEARVQAPGAQRRTFFVERLLRE
VVLRESGLANAPPAQQRRRAWLQAAAYAGVALLTGAALAGLGLSYLGNRAYLQQVRAALE
ARPAVPDPHAATGMPEYVARTLQQADATQAVVKVAQQYHAGAPWSLRMGLFQGQALGEQV
RAGYLRQLNATLLPALAVRLRTGLVDNAQAPQALYYTLKGYLMLGQPQHLDPAQLSALAA
IEAEKLFPGEPALQQALSAHLQAVLESPTHVRALSLDNQRIAQARASLRAADLSTLIYGN
LLLTPPDGTPLRLDKALGLLADTFVRRSGTALSMPVPALYTQPVFAALQREGIGQAVERF
GRDDWVFGGAALDASARATLVREVGQRYTADYIRYWDGLLADLQLRPSADLAGASATAAK
LAGPSSPLRLLLGVVGEHTQAMDRAPPADPAQRALAAAASSAGAKANAAAAKLPGGAAIS
AALATPADGAAAAAPAPGAAISEHFLALNALAAGAPGSTPLDHLLSVLDQLGKQLLVISQ
GGGDAAAANAQLALARQEMAQLPPPVTDWLQSLAGSSATLMTQGARAALDAQVRQSVGEV
CTDFVRGRYPFDPEAQVEIPLQNFGELFGSGGRLETLYTGTVKPLLDTQSPQWRWKDGPD
AVIGAPGLPVQLQLAQRIRQKYFRGGPTPQIGFTVLAPTLGEGVTRLTLDIEGQRYDYQP
GAAQSMPMIWPGPVPGHVSIAAFGADGVALGTLDYQGDWALFRALQAGHLENPSDLRFVA
SFALGGHDVQVPLRAGNLRHPFLDRDVQHFACGG
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgaagacgctgttgtccaagctgagcgcaacggtggtggtcggcctgttggcgctgtgc
ctgctgtcggtgttgctgtgggtgggtgggccgtatgtggcgctggccggctggagcccg
ctgagcagcgtggcggcgcggttgctggcgatcgtgttgctgctggtggtgtgggtgggt
gtgctggcgctgcgccgctggcgcaggcaggcgcgtgcggcgaccttgtccagcgccctg
gcggcgcccggccgcgacgacgaccgcgagctgcgcagcggacaggaacgcgcgcagctg
caggcgcgctttcagcaggcgatccagctgctacgcaagcggcgcggcggcgccgatctg
tatacgctgccgtggtatgcgctgatcggcccgcccggttcgggcaagagcaccttgctg
cagcattcgggcctgcagtttccgctggctgcgcgcatgggcgatgcggcgttgcgcggc
gtcggcggcacccgcgattgcgaatggtggttcaccgacgaagcggtgttcctggacacc
gccgggcgctacaccacgcaggattcggatcaggcggtggatgccggcgcgtggcgcgat
ttcctgcgcctgctgcgacgctatcgcccacgccgcccgctcaacggcgtgttggtgacg
atgagcatgtcggacctgttgctgctcgacgatgccgagcgcgacacgcatatgcaggcg
atccgccgccgcctggacgagctggccgagcagttgcaggccagcgtgccggtgtatctg
atcttcaccaagtgcgatctgatcggcggcttcggcgagttcttcgacgatctgacgccg
gcgcagcgcaaccaggtgtggggcatgacatttgcgctggcgcagaccctggacgggcac
gcggcgcgcaagttcgccgacgagttcggcgtgctgcagcagcagctgagcgcgcgcctg
ttcgaacgcctgaacctggagcgcgaccgtctgcggtgtgcggcgatcctgtcgtttccg
caacaggttgccgctcttggcgagcgtgcacggcaatttgtcgaaggcacgttcgccggc
aatgcgtatggcccggcaccgctgctgcgcggggtgtacttcacctccggcacccaggac
ggcacgccgatcgaccgcatgatgggcgcggtggcgcgcaccttcggcctggaagaagcg
cgcgtgcaggcaccgggcgcgcaacgccgcaccttcttcgtcgagcggctgctgcgcgag
gtggtgctgcgcgaatccggcctggccaatgctccgcccgcccagcagcgccgcagggcg
tggttgcaggccgccgcgtacgcgggtgtggcgttgctgaccggcgccgcgctggccggg
ttggggctcagctacctgggcaaccgtgcgtacctgcagcaggtacgtgctgcactggag
gcgcggccggcagtgcccgatccccatgccgccaccggcatgcccgagtacgtcgcgcgc
accctgcagcaagccgatgcgacgcaggcggtggtgaaggtggcgcagcagtatcacgcc
ggcgcgccgtggtcgttgcgcatgggattgttccagggacaggcgttgggcgagcaagtg
cgggcgggctatctgcgtcagctcaacgccaccttgttgccggccttggcggtgcgcctg
cgcaccggtctggtggataacgcgcaggcgccgcaggcgctgtactacacgctcaagggc
tatctgatgctgggccagccgcagcatctggacccggcgcaactcagcgcgctggcggcg
atcgaagccgaaaaattattcccgggcgagccggccttgcagcaggcgctgagtgcgcat
ctgcaggcggtgctggagtcgcccacgcacgtgcgtgcgctgtcgctggacaaccaacgc
atcgcccaggcacgtgccagcctgcgtgccgccgatctgtcgacactgatctacggcaac
ctgttgctgaccccgccggacggcacgccgttgcggctggacaaagcgctgggcctgctg
gccgacaccttcgtgcgccgcagtggcacggcgttgtccatgccggtgccggcgctgtac
acacagccggtgttcgccgccctgcaacgcgagggcatcggccaggcggtggaacgcttc
ggccgcgacgattgggtcttcggcggtgcggcgctggatgcgtctgccagggccacgctg
gtgcgcgaagtggggcagcgctacacggccgactacatccgttactgggatggactgctg
gccgatctgcaactgcgcccctcggccgatctggccggtgccagcgccactgccgccaag
ctggccgggcccagttcgcccctgcggctgctgctgggcgtggtgggcgagcacacccag
gcgatggaccgcgcaccgccggcagaccccgcgcaacgcgcgctggcggctgccgccagc
tcggcaggcgccaaggcgaatgcggccgcggccaaactccccggcggggcggcgatcagc
gccgcgctggccacgcccgccgatggtgccgcagctgcggcgccggcaccgggtgcggcg
atcagcgagcattttctggcgctcaacgccttggccgccggcgcgcccggcagcacgccg
ctggaccatctgctgagcgtgctcgatcagctcggcaagcaattgctggtgatctcccag
ggcggcggcgatgccgcggcggccaacgcgcaactggcattggcccggcaggaaatggcg
caactgccaccgccggtgaccgactggctgcagagcctggccggcagcagcgccaccttg
atgacccagggtgcacgcgccgcactggatgcgcaggtcaggcaatcggtgggcgaggtg
tgcacggatttcgtgcgtggccgctacccgttcgatccggaggcgcaggtggagattccg
ctgcagaatttcggcgagttgttcggcagtggtgggcgtctggagacgctctacaccggc
accgtcaaaccgctgctggacacccagtccccgcaatggcgctggaaggatggcccggac
gcggtcatcggcgcacccggtctgccggtgcaactgcagttggcgcaacggatccggcag
aaatattttcgcggcgggcccacgccgcagatcggctttaccgtgctggcgcccacgctg
ggcgagggcgtgacccggctgacgctggatatcgaaggccagcgttacgactaccagccc
ggcgcggcgcaaagcatgccgatgatctggcccggcccggtgccggggcatgtttccatc
gccgcgttcggcgccgatggcgtggcgctgggaacgctcgactaccagggcgactgggcg
ctgttccgtgcgctgcaggccgggcacctggaaaacccatcggatctgcgctttgtcgcc
agcttcgcgcttggcggccacgacgtgcaggtgccgctgcgtgccggcaacctgcgccac
ccgtttctggaccgcgacgtccagcacttcgcgtgcggcggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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