KEGG   Xanthomonas citri subsp. citri UI6: J158_03972
Entry
J158_03972        CDS       T03894                                 
Name
(GenBank) replication restart DNA helicase PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
xcj  Xanthomonas citri subsp. citri UI6
Pathway
xcj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xcj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    J158_03972
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcj03400]
    J158_03972
Enzymes [BR:xcj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J158_03972
DNA repair and recombination proteins [BR:xcj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     J158_03972
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR SH3_16 AAA_30 AAA_19 zf-CHY
Other DBs
NCBI-ProteinID: AJY88336
Position
4467079..4469301
AA seq 740 aa
MSSTVATLRVALPVPLPQLFDYLPPADAAPTDPARVGCRVRVPFGPRELVGVVVELGQLP
AADGLRPALAWCDQAPLLVDELARSLHWLARYTHAPLGEAQASALPGPLRRGEPLADTHA
WAWQLTEAGRTGSTSLRAGSRPALLAALLRTGAVGEEQLDPLLPQWREAARSLAKREYAE
RVAVPADTIPPRPGNGPPLNDEQQAATAAIRAHSGFATYLLDGVTGSGKTEVYLQAIADC
LAAGKQALVLVPEIGLTPQTLGRFRARLGVPVHALHSGLSDGERARVWAAAWRGQAQLIV
GTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRGKALDVPVILGSATPSL
ESLHNAYAGRYQHLRLSQRAGEARPPRVRVLDVRKRPLKDGLSPEVLAGIGTTLARGEQV
LVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRLQCHHCGARQPAPLAC
PACASLALQPQGIGTERLEERLTEAFPDVPVVRIDRSTTQRRDALETQLARLGTEAGILV
GTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLAQQLIQVAGRAGRADRPGEVWLQ
THHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFAHLALFRAEAKDVAAANQFLMAVR
GLTTADSTAQSPAFAAVECYGPMPAPMPRRAGFQRSQLLLSAQQRSALHRLLDAQLPAIY
ALPQARRVRWSLDVDPIDLY
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgtcttcgaccgtcgccaccctgcgcgtcgccttgccggtgccgctgccccagttgttc
gactatctgcctccggccgatgcggcgccgaccgatccggcgcgggtcggctgccgggtg
cgggtgccgttcgggccgcgcgagctggtcggggttgtggtggagctcgggcaactgccc
gcggccgacggcctgcgcccggcactggcgtggtgcgaccaggccccgctgctggtcgat
gaactggcccgctcgctgcactggctggcccgctacacccacgccccgctcggcgaggcc
caggccagcgccctgcccggcccgcttcggcgcggcgagccgctggccgatacccacgcc
tgggcctggcagctgaccgaagccggccgcaccggctccaccagcctgcgcgcaggcagc
cgccccgccctgctggcagccctgctgcgcaccggtgcggtcggcgaggagcaactggac
ccgctgctgccgcagtggcgcgaagccgcgcgcagcctggccaagcgcgagtacgccgag
cgcgtggcggtgccggccgacacgattccgccacgccccggcaacggcccgccgctcaac
gacgaacaacaggccgccaccgccgcgatccgcgcgcatagcggctttgccacctatctg
ctcgacggcgtcaccggcagcggcaagaccgaggtctacctgcaggcgatcgccgattgc
ctggccgccggcaagcaggcgctggtgctggtgcccgagatcgggctgacgccgcagacc
ctggggcgtttccgtgcgcgcctgggcgtgccggtgcatgcgctgcactcgggtctgtcc
gatggcgaacgcgcgcgggtttgggcggcggcctggcgcggccaggcacagctgatcgtc
ggcacccgctcggcggtgttcaccccgctgcccaacgccggcctgatcgtgatcgacgaa
gaacacgacggcagctacaagcagcaggacggcatccgctatcacgcgcgcgatttcgcg
ctggtgcgcggcaaggcgctggatgtgccggtgatcctgggcagcgccacgccatcgctg
gaaagcctgcacaacgcctacgccggtcgctaccagcatctgcgcctgtcgcagcgcgcc
ggcgaagcgcgtccgccgcgcgtgcgcgtgctcgacgtgcgcaagcgcccgctcaaggac
ggcctgtcgcccgaggtgctggccggtatcggcaccaccctggcgcgtggcgaacaggtc
ctggtgttcaagaaccgccgcggctatgcaccggtgctgctgtgccacgactgcggctgg
accgctgcctgccagcgctgcagcacgccgctgcaccagaccccgatgaccgtgcatgca
ggcggccggcgcctgcagtgccaccattgcggcgcgcgccaacccgcaccgctggcctgc
ccggcctgcgccagcctggcgctgcagccgcagggcatcggcaccgagcggctggaagaa
cgcctgaccgaggcgtttccggacgtcccggtggtgcgcatcgaccgcagcaccacccag
cgccgcgacgcactggaaacccagctcgcccggctcggcaccgaggccggcatcctggtc
ggcacgcagatcctggccaagggccacgacctgccgcggctaaccatggtcgtggtggtc
ggcatcgacgaaggcctgttctcggccgacttccgcgccgccgaaaaactggcccagcag
ttgatccaggtggccggacgcgccggccgtgccgaccggccgggcgaagtctggctgcag
acccatcaccccgaacacccgttgctgcagaccctggtcaatggcggctaccacgccttc
gccgacgccgaactgcagcagcgcgaggccgcgggatttccgccgttcgcgcatctggcg
ctgttccgcgccgaggccaaggacgtggccgcggccaaccaattcctgatggcggtgcgt
ggcctgaccacggcagacagcaccgcacaatcgcctgcctttgccgcagtggagtgctac
ggcccgatgccggcaccgatgccacgccgcgccggtttccagcgcagccagttgctgttg
tccgcgcaacagcgctcggcgctgcatcgtctgctggatgcgcaactgcctgcgatctat
gcgctgccgcaggcgcggcgcgtacgctggtcgctggatgtggatccgatcgatctgtat
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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