KEGG   Xanthomonas citri subsp. citri UI6: J158_04282
Entry
J158_04282        CDS       T03894                                 
Name
(GenBank) ATP-dependent DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
xcj  Xanthomonas citri subsp. citri UI6
Pathway
xcj03420  Nucleotide excision repair
xcj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:xcj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    J158_04282
   03430 Mismatch repair
    J158_04282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcj03400]
    J158_04282
Enzymes [BR:xcj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J158_04282
DNA repair and recombination proteins [BR:xcj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     J158_04282
   MMR (mismatch excision repair)
    Other MMR factors
     J158_04282
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_30 AAA_12
Other DBs
NCBI-ProteinID: AJY88637
Position
complement(4826761..4828932)
AA seq 723 aa
MLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAVTFTNK
AAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQLRLVKR
VVQALELDESKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQERCDRS
GLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGESGNVF
VVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRI
GKQLWTDSGNGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQSRALE
EALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIGDRTLD
EVRRLARASALSLWEAAMLCTQQNTLAARARNALATFLSLIGQLHAETGEMELAERIDHV
LMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASL
EAGAGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEERRLAY
VGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLNEVRPKVQVSRTASLGAAR
GGPVHGIVETAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVMAYANL
TVV
NT seq 2172 nt   +upstreamnt  +downstreamnt
ttgctcgatcatttaaaccccgcccagcgcgaggccgtttctgcgccgccggggcactac
ctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatccatcgcatcgcctgg
ctcaatgaagtccagggcgtgcccaaccacggcatcttcgcggtgaccttcaccaacaag
gccgccggcgaaatgcgtcaccgtaccgacctgcagctgcgcaatggcagccgcgggatg
tggatcggtacatttcacgggctggcacatcgcctgttgcgtctgcattggcaggatgcg
cggctgccggaaggcttccaggtcatggacagcgacgaccagttgcggctcgtcaagcgc
gtggtgcaggcgctggagctggacgagagcaagtatcctcccaagcagatgagctggtgg
atcaacgagcagaaggatgagggccgccgtccgcagcatatccagcccgagcccaacgac
gattggaccgaggtgcgccggcaggtgtatgcggcctaccaggaacgctgcgaccgctcc
gggctgctggatttcgccgagttgctgctgcgcgcgcatgagttgctgcgcgacacgccg
gcattgctggcgcattaccgcgcgcgcttccgcgagattctggtggacgagttccaggac
accaacgccatccagtacgccttcgtgcgcgtgctggccggcgagtcgggcaatgtgttc
gtggtcggcgacgacgaccaggccatctatggctggcgcggcgccaaggtcgaaaacgtc
cagcgctttctgaaggatttccccggtgcgcagaccgtgcggctggagcagaactaccgt
tccagcgcgaatattctgggcgctgccaatgcggtgattgcgcacaacccggaccgtatc
ggcaaacagctgtggaccgattcaggcaatggcgacccgatcgatctgtacgcggcctac
aacgaagtggacgaagcgcgctatgtggtcgagcgtgcacggcagtgggtgcgcgacggc
ggcagttatggcgaagtggcggtgctctaccgcagcaacgcgcaatcgcgcgcgctggaa
gaagcgctgatttccgagcagttgccgtaccgcgtgtatggcggcatgcgtttcttcgaa
cgtgccgaaatcaaggacgcgttggcttacttgcgtctgctgaccaatcgcagcgacgac
gctgcgttcgaacgcgcggtcaacacgcccacgcgcggcattggcgatcggacgctggat
gaggtgcgccggctggcacgtgccagtgcgctgtcgttgtgggaagcggcgatgctgtgc
acgcagcagaacacgctggccgcgcgcgcacgcaatgccctggccaccttcctcagcctg
atcggccagctgcatgccgaaaccggcgagatggaactggccgaacgcatcgaccatgtg
ctgatgcgctcgggcctgcgcgagcattgggccaaggaaagccgcggcgggctggattcg
gaatcgcgtaccgagaacctggacgaactggtgtcggtcgcctcgcgcttcacccgcccg
gacgatgaagacagccagggcatgaccgagctggtcgccttcctggcttacgcctcgctg
gaggccggcgcaggccaggcgcaggctggcgaagaaggcgtgcagctgatgacgctgcat
tcggccaagggcctggaatttccgattgtgttcctggtcggcctggaagacggcctgttt
ccgagtgcgcgctcgctggaagagagcgggcggctggaagaagagcgtcgcctggcgtac
gtgggcatcacccgcgcgcggcagaagctggtgctgtgctacgccgaatcgcgccgtatc
cacggccaggacaattacaacgtgccctcgcgcttcctgcgtgagattccgcgcgacctg
ctcaacgaagtgcgcccgaaggtgcaggtttcgcgcaccgcatcgctgggcgcggcgcgc
ggcggcccggtgcatggcatcgtggaaacggcaccgatcaagctcggcgccaacgtcgaa
caccccaagttcggcggcggcgtggtcgtcgattacgaaggcgctggcgcgcatgcgcgc
gtgcaggtgcagttcgacgaggtcggcgccaagtggctggtgatggcctacgccaatctg
actgttgtctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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