KEGG   Xanthomonas citri pv. citri MN12: J164_01385
Entry
J164_01385        CDS       T03735                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
xcm  Xanthomonas citri pv. citri MN12
Pathway
xcm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    J164_01385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcm03400]
    J164_01385
DNA repair and recombination proteins [BR:xcm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     J164_01385
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      J164_01385
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_23 AAA_16 RsgA_GTPase nSTAND1 AAA_25 AAA_21 DnaJ_CXXCXGXG nSTAND3 NACHT Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: AJY94686
UniProt: A0A0U5FH63
Position
complement(1422242..1425205)
AA seq 987 aa
MAMDFIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQP
RCPDHGFPLEAQTVSQMVDHMLAQDQEQRYMLLAPVIRDRKGEHAQVFEQLRAQGFVRVR
VDGELYEIDAVPPLALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGEGMVAVQSLD
DPAAAPHLFSSKYSCPVCDYSLPELEPRLFSFNAPVGACPSCDGLGVAEFFDPDRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIASLAKHYKFDVDAVWNTLPAKVRQAVLFGSGDEVISF
TYFTDAGGRTTRKHRFEGILPNLERRYRETESPAVREELTKYVSQQPCPACNGTRLNRAA
RNVFVADRPLPELVVLPVNEALSFFRGLSLPGWRGEIAAKIVKEIGERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADHVLDIGPGAGVHGGEICAQGTLDDILKSPRSLTGQYLSGKRRI
EIPKQRHKPNPKMMLHLRGATGNNLKNVDLDIPAGLLTCITGVSGSGKSTLINDTLFTLA
ANEINGASHTVAPHREVENLDLFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVP
EARARGYSPGRFSFNVRGGRCEACQGDGMIKVEMHFLPDVYVPCDVCHGKRYNRETLEIR
YKGFNISDVLQMTVEDALRLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGTILVSGTPEEVAAHKASYTGQFLAKMLPSVKARETRPAAMANKPDA
RPPRKVKPEKVAKAAKSATKKTAKKAS
NT seq 2964 nt   +upstreamnt  +downstreamnt
atggcgatggatttcatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgac
ctcgacctgccccgcgacaaactgatcgtgatcaccggcttgtccggctcgggcaagtcg
tcgctggcattcgacaccatctatgcagaaggccagcgccgctacgtcgagtcgctgtcg
gcgtatgcgcgccagttcctcagcgtgatggaaaagccggacctggaccacatcgaaggc
ttgtcgccagcgatttcgatcgaacagaaatccacctcgcataacccgcgctccaccgtc
ggcacgatcaccgagatctacgactacctgcgcctgctgtacgcacgcgtgggccagccg
cgctgccccgaccatggcttcccgctggaagcgcagaccgtcagccagatggtcgaccac
atgctcgcccaggatcaggagcagcgctacatgttgctggccccggtgatccgcgaccgc
aagggcgagcatgcgcaggtgttcgaacagttgcgtgcgcagggcttcgtgcgcgtgcgc
gtggacggcgaactctacgaaatcgatgcggtgccgccgctggcattgcgccagaaacac
accatcgaagcggtgatcgaccgctttcgtccgcgcgaagacatcaagcagcgtcttgcg
gaaagtttcgaaaccgcgctcaagctcggcgaaggcatggtggcggtgcagtcgctggac
gacccggcagccgcgccgcacctgttctcgtccaaatacagctgcccggtgtgcgactac
tcgctgccggagctggaaccgcgactgttttcgttcaacgcaccggtgggcgcctgcccg
agctgcgatggcctgggcgtggccgaattcttcgaccccgatcgcgtggtcgtgcatccc
gaactgtcgctgtcggccggcgcggtgcgcggctgggaccgacgcaatgcctattatttc
cagctgattgcttcgctggccaagcactacaagttcgacgtggatgcggtgtggaatacg
ctgccggccaaggtgcggcaggcggtgctgttcggcagcggcgatgaggtgatcagcttc
acctacttcaccgatgcgggcgggcgcaccacgcgcaagcatcgcttcgagggcatcctg
ccgaacctggaacgccgttaccgcgaaaccgaatcgccggcggtgcgcgaagagctgacc
aagtacgtcagccagcaaccctgccccgcctgcaacggcacgcgcttgaatcgcgctgcg
cgcaacgtgttcgtggccgatcgcccactaccggaattggtggtgcttccggtcaacgag
gcgttgagctttttccgtggcctgtcgctgccgggttggcgcggcgagatcgcggccaag
atcgtcaaggaaatcggcgagcgactgggcttcctggtcgatgtgggtctggattacctc
accctggagcgcaaggccgacaccttgtccggcggtgaggcgcagcgcattcgcctggcc
agccagatcggcgccggcctggtcggggtgatgtacgtgctggacgagccctcgatcggc
ctgcaccaacgcgacaacgaacgcctgctcggcacgctgacgcggttgcgcgatctgggc
aacaccgtgatcgtggtcgagcatgacgaagatgcgatccgcctggccgaccatgtgctg
gacatcggccccggtgcgggcgtgcatggcggcgaaatctgcgcgcaaggcacgctggac
gacatcctgaaatcgccacgctcgttgaccggccaatacctgtcgggcaagcgccgcatc
gagattcccaagcagcgccacaagcccaacccgaagatgatgctgcatctgcgcggggcc
actggcaacaacctgaagaatgtcgacctggatattcccgccggcctgctgacctgcatc
accggcgtgtccggctcgggcaaatcgacgttgatcaacgacacgttgttcaccctggcg
gccaacgagatcaatggcgcctcgcacacggtggcaccgcatcgcgaagtcgagaatctg
gacctgttcgacaaggtggtggatatcgaccagtcgccgatcggacgcacgccccgttcc
aatccggcgacctataccggcatgttcacgcccttgcgcgagctgttcgcgcaggtaccc
gaggcgcgtgcacgcggctattcgccgggccgcttcagcttcaacgtgcgtggcggccgc
tgcgaggcctgccagggcgacggcatgatcaaggtggagatgcacttcctgcccgatgtc
tacgtgccctgcgacgtctgccacggcaagcgctacaaccgcgaaacgctggagatccgc
tacaagggcttcaacatcagcgacgtgctgcagatgaccgtggaagatgcgctgcgcctg
ttcgagccggtgccgtcgatcgcgcgcaagctggaaacgctggtcgatgtgggattgagc
tacatcaagctgggccagagcgcgaccacgctctccggcggcgaggcgcagcgcgtcaag
ctgtccaaggagctgtcgcggcgcgataccgggcgcaccctgtacatcctcgacgagccg
accaccgggctgcacttccacgatatcgaagcgttgctcggcgtgctgcacaagctgcgc
gacgaaggcaacacggtggtggtgatcgaacacaatctggacgtgatcaagaccgccgac
tggatcgtggatctgggcccggaaggcggccatcgtggcggcaccatcctggtctccggt
acgccggaagaagtggctgcacacaaggcgtcctacaccgggcagttcctggccaagatg
ctgccgtcggtgaaggcgcgcgagacgcgtccggcggcaatggccaacaagcctgatgcg
cgtccgccgcgcaaggtcaaaccggagaaggtggccaaggctgccaaatccgccaccaag
aagactgcgaagaaggcaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system