KEGG   Xiphophorus couchianus (Monterrey platyfish): 114133528
Entry
114133528         CDS       T05908                                 
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114133528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xco03400]
    114133528
Enzymes [BR:xco01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     114133528
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     114133528
SSDB
Motif
Pfam: UDG AT_hook
Other DBs
NCBI-GeneID: 114133528
NCBI-ProteinID: XP_027855323
Position
2:complement(27251137..27256880)
AA seq 403 aa
MEEKQFTALTVPTDYFQQWYQANQQHPEAQYMLPYHSLGHYADGYMEEPVMAELSVHREP
SENQEPFYHSYPPASGHYQEQIGQPSFSEHLQHSQHPQQTEHQHMIQQREPDLQPHAPPP
AVTPVKKKRGRPAKQQVADKEVKEEMDEAEAAKKAKRVLNRFNGMSVAEVMAKTLPDVLA
YNLDILIIGINPGLISAYKGRHYPNPGNHFWKCLFLSGLTEQQLNYMHDQSLPEKYSIGF
TNMVERTTPGSKDLSSKEIREGGRQLLEKLQKYKPLIAAFNGKGIYEIFCKEIFGVKAKN
LEFGLQPYKIPDTETVCFLMPSSSPRCAQFPRAQDKVHFYIKLKELRDQMKGLTPNGEVL
ETRYSFDLQLAKEDAKRMAIKEEQVDPEYESCSGVHDGVRQSS
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggaggaaaagcagtttacagcattgacggttcccacggattattttcagcagtggtac
caggccaatcagcagcaccccgaggctcaatacatgctaccgtatcacagcctgggccat
tatgccgacggctacatggaggagcccgtcatggcggagctgtctgtccacagggaacca
tcggaaaaccaggagcccttttaccacagctaccctccggcgtccggtcattaccaggag
cagatcggccagccgagcttcagcgagcatctgcagcactcgcagcacccccagcagact
gagcatcagcacatgatccagcagcgggaacctgaccttcaacctcacgctcctcctcca
gctgtgacgccggtaaagaagaaaagaggccgaccggctaagcagcaggtggcggataag
gaggtgaaggaggaaatggatgaagccgaagctgccaaaaaggccaagcgggttctgaac
cgcttcaacggcatgagcgtggctgaagttatggcgaagacgctccctgacgtcctggcc
tacaatctcgacattttaataattggaatcaacccaggactaatatcagcctacaaagga
cgccattacccaaacccggggaaccatttctggaaatgtctgtttctgtctggtctgact
gaacagcagctcaactacatgcacgaccagagcctgcctgagaaatacagcatcggcttc
accaacatggtggagaggaccacaccgggcagcaaggacctgtccagtaaggaaatccga
gagggaggtcgacaactgctcgaaaagctgcagaagtacaagccgctcatcgccgctttt
aatggcaaaggaatttatgaaatattttgcaaagaaatctttggtgtaaaggccaagaat
ctcgagtttggcctgcagccttacaaaatcccagacactgaaacggtgtgcttcctgatg
ccgtcgtcgagcccccgctgtgcccagttcccccgcgctcaagacaaggtgcatttctac
ataaagctgaaggaactgcgtgaccagatgaaaggcctgacacccaacggggaggtgctg
gagacgcggtactctttcgacctgcagctggctaaagaggacgctaaaaggatggcaatc
aaagaagagcaagtggatccagaatatgaaagctgtagtggggttcatgatggggtgagg
cagagcagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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