KEGG   Xiphophorus couchianus (Monterrey platyfish): 114141000
Entry
114141000         CDS       T05908                                 
Symbol
cars2
Name
(RefSeq) probable cysteine--tRNA ligase, mitochondrial
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    114141000 (cars2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:xco01007]
    114141000 (cars2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xco03016]
    114141000 (cars2)
Enzymes [BR:xco01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     114141000 (cars2)
Amino acid related enzymes [BR:xco01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   114141000 (cars2)
Transfer RNA biogenesis [BR:xco03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    114141000 (cars2)
 Prokaryotic type
    114141000 (cars2)
SSDB
Motif
Pfam: tRNA-synt_1e tRNA-synt_1g tRNA-synt_1 DALR_2 tRNA-synt_1f ROXA-like_wH EFhand_Ca_insen
Other DBs
NCBI-GeneID: 114141000
NCBI-ProteinID: XP_027867187
Position
24:complement(5068510..5076144)
AA seq 552 aa
MIRSGKALCRVLTSSCCVPVRHSVSGKAWITPKGFDTGIKTFNSLTKQKEALILAREGTA
TWYSCGPTVYDHAHLGHACSYVRFDILQRILTRVFGVTVIHAMVITDIDDKIIRRSWEEN
VSPDVISRMYEEEFKRDMLSLKVVPPAVYLRVTENVHHIVAFIEGIIRNGHAYATKEGDV
YFDVQSIGDRYGKFVGAVSPHGQSGSSNKRDSRDFALWKRSKAQEPHWESPWGRGRPGWH
IECSTVASHMFGNQLDIHSGGIDLAFPHHENEIAQSEAFHQCGQWANYFLHSGHLHHKGS
PEKMSKSLKNYITIKDFLQSHTAEEFRMFCLSTKYRSAIDYSDGSMSEARTSLETIRTFI
SAARAYMKGHLHCPPTQEDLLWQRLTEAKSNILTALADDFDTPRAVGALMKLVYHGNCQL
RPVSTAEGGVRSPAVFGAMVTYVRDVLDAFGIDLLHSREADVMSSGGNLQAVVEQLTRFR
SEVRAFALTRQDSQDKKSDLSPDRIPLLKSCDTLRKDLAPLGVVIKDRGATSTWEIKPTQ
SGQRSHEPDQQT
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgatccggagtggaaaggccctgtgcagggtcctcacctccagctgctgtgtccctgtc
agacacagtgtttcgggaaaggcctggatcacacctaaaggctttgacacgggaataaag
accttcaacagcttgaccaaacagaaagaagctctgatcctggcaagagaaggaacagcc
acctggtacagctgtggacctacagtgtatgaccatgctcacctgggccatgcatgttct
tatgtcaggtttgacatcctgcagaggatcctgaccagggtgtttggcgtcaccgtgatc
cacgccatggtcatcactgacatcgacgacaagatcatcagaagaagttgggaggaaaat
gtttctccagatgtcatttccagaatgtatgaggaggaattcaagagggatatgctgtcg
ttaaaggtggttccccctgccgtgtatctaagagtcacggagaacgtgcatcatatcgtt
gcatttattgaagggatcatcagaaatgggcacgcttatgccacaaaggaaggcgacgta
tattttgacgtgcagtccatcggtgaccgctatgggaagtttgttggcgctgttagccct
catggacagtctggtagctcaaacaaacgagactccagggattttgctctgtggaagcgc
tctaaagctcaggagccacactgggaatctccgtggggccgaggacgacccggctggcat
atcgagtgctccactgttgccagccacatgtttgggaatcagctggatattcactctgga
ggaatcgacctggccttccctcaccatgagaacgagatcgctcagagcgaagcctttcat
cagtgtggacagtgggccaactacttccttcattcaggtcatttacaccataaaggcagt
ccagagaaaatgtctaaatctctgaagaactatatcactatcaaggattttctacagtca
cacactgctgaagagtttcggatgttttgtctgtcgaccaaatatagatctgccatagat
tacagtgacggcagcatgtcggaggcccgcacctctctggaaaccatccgcacctttatt
agtgccgctcgggcctacatgaagggccacctccactgtccgcctacgcaggaggatctt
ctctggcagagactgactgaagctaaatccaacatcctgacagcgctagccgatgacttt
gacacacccagagccgtcggtgcactgatgaagttggtttatcatggaaattgccagctg
cggcccgtttctacggcagagggaggcgttcggagcccagcggtgttcggagccatggtg
acctacgtcagagatgtgctggacgcgttcgggatcgacctgctgcacagtcgggaggcc
gacgtgatgagcagcggcggaaatctgcaggctgtggtggagcagttgactcgtttcaga
agcgaggtccgagcgttcgctctgacccgtcaggactctcaggataagaaatctgacttg
tccccagacagaatccccctcctgaaatcctgcgacaccctcaggaaggacctggccccg
ttaggagtggtgataaaggacagaggagcaacgtccacctgggagataaagccgactcag
agtggacagagaagccacgaaccggaccagcaaacatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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