KEGG   Xiphophorus couchianus (Monterrey platyfish): 114141377
Entry
114141377         CDS       T05908                                 
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    114141377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114141377
Transcription factors [BR:xco03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    114141377
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_6 zf-C2H2_jaz zf-Di19 zf-UBP zf-met zf-C2H2_2 zf-C2HC_2 zf-Sec23_Sec24 zf-RING_7 Zn-ribbon_8 HVO_2753_ZBP DUF5810 zf-C2H2_5 zf-H2C2_5 DUF3268
Other DBs
NCBI-GeneID: 114141377
NCBI-ProteinID: XP_027867691
Position
Unknown
AA seq 577 aa
MEEQKDPDGPNIKQEQEELLDKQLKNDQHAEDLQIKEEVDEYCTCQDEVRLVLKEETDTL
GMNTAPEQRNNREPEPIRDRLQNARLAENQQQEGKKEESGFCKHPQPRSNKSCQKSRVQS
DDAHGSKHRRRSRSLSQTEKSLFSCKVCGKSFSQSSHLNNHMRSHASKKQYPCEVCGKFL
NDKGSLTVHMRTHTGEKPFTCPTCGKSFGARSSFIAHVRTHTGEKPFPCPSCEKSFIVKS
HLITHMRIHTGEKPFQCLTCGKRFGAKSNLNTHMRTHTGEKPFACVSCGKSFSVRSHLIT
HLRTHTGEKPYSCPYCGRSFSLRSHLNVHMSTHTGEKPFPCVACGKSFRVRSSLTIHMRT
HTDEKLHICDVCCKGFTQSSRLASHMRIHTGERPFPCPTCGKSFSAKTYLNTHMRTHTDE
KSYLCVICGNSFSRKSNLNRHMRTHTGEKPYDCEVCGKSFGCSGSLTVHMRSHTGEKPFP
CVTCGKSFSVRSYLVIHMRTHTGEKPFPCVTCRKSFLLRSHLTRHMRVHTGEKPFPCSTC
GKGFSVRCHMMAHMRTHKQEKGLSDTWPVGNVSKELR
NT seq 1734 nt   +upstreamnt  +downstreamnt
atggaagaacagaaggatccagatggtccaaatataaagcaggaacaggaggaactgctg
gataaacagctgaaaaatgaccaacatgctgaagatctgcagattaaagaggaagtggac
gaatactgcacctgccaggacgaagttcgcctggttctgaaggaggagacggacacattg
gggatgaatactgctcctgaacagagaaacaacagggaaccagaaccaatcagggaccga
ctccagaacgcgcgactggctgaaaaccagcaacaggaagggaagaaggaagaatcagga
ttctgtaaacatccacaaccaaggtcgaataagagctgtcagaaatccagagttcaaagt
gacgatgcacacggttccaaacatagaaggcggagcagatctctgagccaaacagaaaaa
agtttgttttcctgtaaagtgtgtggcaagagtttctcccagagtagccatctgaacaac
cacatgagatcgcacgcaagtaagaaacaatacccctgtgaggtctgcggtaagttttta
aatgacaaaggtagcttaacggttcacatgagaacccacacaggtgagaagcctttcaca
tgtcccacctgtgggaaaagttttggtgcgaggagcagcttcattgctcatgtaagaact
cacacaggtgagaagccatttccctgtccaagctgtgagaaaagtttcattgtaaaaagt
catctaatcacacacatgagaattcacacaggtgagaaacctttccagtgtctcacctgt
ggaaaacggtttggtgctaaaagcaatttaaacactcacatgcgaacacacacgggtgaa
aaaccttttgcatgtgtgagctgcgggaaaagtttcagtgtaaggagtcacctgatcact
catctgagaacacacacaggtgagaagccatactcctgtccatactgtggcagaagcttc
agtctgcgaagtcatttaaatgttcacatgagcacacatacaggagagaaaccttttcca
tgtgtggcatgtggaaaaagcttcagagtgagaagcagtttgacaattcacatgagaacg
cacacggatgagaagctgcacatctgtgatgtgtgctgtaaaggtttcactcagagcagc
cgtctggcttctcacatgaggatccacacaggggagaggccgttcccatgtcccacatgt
ggaaaaagtttcagtgccaaaacatatctgaatacacacatgaggacacacacagatgag
aagtcctatctgtgtgtgatctgtgggaacagcttcagtcgaaaaagcaacttgaacaga
cacatgaggacgcacaccggcgagaaaccctatgattgtgaagtttgtgggaaatccttt
ggatgtagcggtagcttgaccgtccatatgagatctcacacaggtgagaagccattccca
tgtgtcacctgtggaaaaagctttagtgtaagaagttacctggttattcacatgcgaacc
cacacaggtgagaagcctttcccatgtgtcacctgtcggaagagcttccttttacggagt
catttgactcgtcacatgagagttcacaccggcgagaagccgttcccatgttcgacctgt
gggaaaggtttcagtgtgagatgtcacatgatggctcacatgagaactcacaaacaggag
aaaggtctttctgacacatggcctgtgggaaacgtctccaaggagttgagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (18)   
   Pfam (18)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system