KEGG   Xiphophorus couchianus (Monterrey platyfish): 114142957
Entry
114142957         CDS       T05908                                 
Symbol
cyld
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
  KO
K08601  ubiquitin carboxyl-terminal hydrolase CYLD [EC:3.4.19.12]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04217  Necroptosis
xco04622  RIG-I-like receptor signaling pathway
xco04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    114142957 (cyld)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    114142957 (cyld)
   04625 C-type lectin receptor signaling pathway
    114142957 (cyld)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xco01002]
    114142957 (cyld)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xco04121]
    114142957 (cyld)
Enzymes [BR:xco01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     114142957 (cyld)
Peptidases and inhibitors [BR:xco01002]
 Cysteine peptidases
  Family C67
   114142957 (cyld)
Ubiquitin system [BR:xco04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    114142957 (cyld)
SSDB
Motif
Pfam: CYLD_phos_site CAP_GLY UCH
Other DBs
NCBI-GeneID: 114142957
NCBI-ProteinID: XP_027870414
Position
4:complement(8753914..8775879)
AA seq 947 aa
MSSALWEKPSGGFREDWRFYMVVKECTVEKPTQKTLRIPRGSLGQACQERNSLGRTLPPC
KGKKSLRILDQTNVVLSLDERDVVELDEKLAELLFPITNCEERCNLLCDEERLERVRDID
CGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGRQL
FRCEEECGVFVALDKLELWEDDDDEDLVPLEENQVRLEDDQDYAPLEINSRVVLREEPER
GTVIFCDLLPGNESLGYYVGVDMDNPIGDWDGMIEGKLVCDFASLEHTRLVPIGDVMPEY
SMQDQRLPKHSFAPRGSDKSSSGQSKPKSKGLAHQCGGRSKSDFYYTLNGSSLDSPAQPK
SKSTWYIDEVGEDPAKSLTDTPPEFSQSSPPTRAPPSSSLSSDNKFHSLPFSLNRKTPEN
ISQGPISLSVGSVMGEQPEPPSPAAPPSPRPPTPPRGQPGLEVGSLVEVKENPPLCGVIR
WVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCRPDSRFPSLH
HSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNSCYLDSTLFC
LFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVMKLRRILEKV
EAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMEKKDKVGVPT
SQQLLEWSFITSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLEDTPRECR
ICAGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPKRKAHRHNKLSVPKELQEGQG
RQGGFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGFNIPQVSPC
PEVEAYLKMTPEELHTLDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgagctctgccctgtgggagaagcctagtgggggcttcagggaggactggcgcttctac
atggttgtgaaggaatgcactgtggagaagcccacccaaaagaccctgaggattccccgc
ggaagcctcggccaagcctgccaggagcgcaacagcctggggcgcacgttgcccccatgt
aagggtaagaagagccttcgcatcctggaccagaccaacgtggtgctgagcctggatgaa
cgggacgtggtggagctggatgagaagctggctgagctgctgttccctatcactaactgt
gaggagcgatgcaacttgctctgcgacgaagagcggctcgaacgggtccgagacatcgac
tgcggctccaaggtacgcgtgcagctgcgctcaggggatgaacctctgcccggagtggtc
cgcttcaaaggctcactgcttcctgacagagccctgtctggaatctggtttggagtggag
ctcctggaggagggtcggggtcagggcttcacggagggctcctaccagggtcgacagctc
ttccgttgcgaggaggagtgtggcgtatttgtggcgttggacaagcttgaactctgggag
gatgatgatgacgaagatttggtcccactggaggagaatcaggttagactggaggacgac
caggactatgctccgctggagatcaactccagggtggtgctgagagaagagcccgagaga
ggaaccgtcattttttgtgacctgctgccagggaacgagagcctgggttactatgtggga
gttgacatggacaatcctatcggagactgggatggcatgattgaagggaagctggtgtgt
gattttgccagtttggagcacactcgacttgttcccattggtgacgtaatgccagaatat
tccatgcaggaccaaaggctgccaaagcacagttttgcccccagaggcagcgacaaatcg
tcctctggccaaagcaaaccaaagagcaaaggattagctcatcagtgtggcggtagaagc
aagtctgacttttactatactttaaatgggagctctcttgattccccagcccagcccaaa
tccaaaagcacatggtacattgatgaagttggagaggaccctgccaagtcgctcaccgac
acccctccagaattcagtcagtcctctccccccaccagagcaccgccctcttcttcgctg
tcaagtgacaacaagttccactcactgcccttcagcctgaaccgcaagacccccgagaac
ataagccaggggcccatctctctctccgtcgggtctgtaatgggcgagcagcccgagccc
ccatcacctgctgcccctccatctccacggcctccgacgcccccacgaggacagccaggt
cttgaggtggggtctctggtggaggtgaaggagaacccccctctgtgtggcgtaatacgc
tgggtgggcctgccgcctggtctgctggagcctttggctggactggagttggaagaagag
tgtcctggatgcaccgatggcaccttcaaggggactcgctacttcacctgcccacccaaa
aaagctttgtttgtgaagctgaaatgttgccggcctgactcccgcttcccatccttgcat
cattcctccaaccccatagagcggtgcaactctatcgcatttgggggctatttgagtgag
gtagtgcacgagaacacccccccacgaactgagaatgatggtctggatgtcatggtggga
aaaaagaaaggcattcaaggccactacaattcctgctacctggattcaaccctcttctgt
ctcttctccttcagctctgtactggacacggttctgttgaggccacgatcaaagactgat
gtggagtattacagagagactcaggagctgctacgcacagagatagtcaatccactgcgc
atacacgggtacgtttgtgctacaaaagtgatgaagctcagaaggatcctcgaaaaagtt
gaagctgcctccggattcacttctgaagaaaaagatcccgaggagttccttaatatcctt
ttccatcacatattgagggtggatccactgctgaaactgaggtctgcaggtcagaaagtc
caagactgttatttttaccaaatctttatggaaaagaaggacaaggttggagttccaacc
agccagcagctgctggagtggtccttcataaccagtgacttgaaatttgcagaggctccc
tcttgccttattatccagatgccacgctttggcaaggacttcaaaatgttcaacaagatt
tttccctccttagagttagacatcacagaccttcttgaagacactcctagggagtgccgc
atctgtgcaggcctggctctctacgaatgcagagactgttatgaggacggggatatcact
gctggcaagattaagcagttctgtgaaaagtgcaatacacaggttcatctccacccgaaa
aggaaagcccatcgacacaacaaactgtccgtcccaaaggagctccaggaaggccaggga
cgtcagggcggctttccccgccagcggatggagctgtttgctgtgctgtgcatcgaaacc
agtcactacgtggccttcgtcaagtacggcagcgccgattctgcctggctcttcttcgac
agcatggcggaccgtgatggaggccagaatggtttcaacataccgcaggtgtctccctgt
cctgaagtggaagcctatctgaaaatgaccccagaggagctgcacaccttagaccccaag
agcatccagggtcaggcgcgacgtctgctctgcgacgcctacatgtgcatgtatcagagt
ccaaccatgagcctttacaagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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