KEGG   Xiphophorus couchianus (Monterrey platyfish): 114144197
Entry
114144197         CDS       T05908                                 
Symbol
polq
Name
(RefSeq) DNA polymerase theta isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xco03400]
    114144197 (polq)
Enzymes [BR:xco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     114144197 (polq)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    114144197 (polq)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc HHH_5
Other DBs
NCBI-GeneID: 114144197
NCBI-ProteinID: XP_027872547
Position
5:complement(13628093..13647699)
AA seq 2664 aa
MTSGSLKKKSYLGQHQIKKKTRILGNNEPLDGEMLLLQTTSGKTNRPISMNKCSLMGGAV
PLPLGDSTLALDEEMLQVMDAVDLSKSEVKRDVKEKHISDPFPPPRPTTPNALSKMERNS
GMMKDRETIPYTNGGVDPLQRGCRSRGDSNKPGWSADCKDLAQKLLFSEDSGEVDHPQRD
QQNNHSNHLSASVCTLPCIETSNSRKADGSSKQKLRRRNSPPSDQKANSSENINPSLDVS
TKYILFSPTRLAAARQRAKLQQSLQNQSASVLTVPSGLELSMLNDTLPPPGVALCAPEQQ
AEKLLLSSWGLPKPVLERYQKHGVTQMFEWQAQCLTVGQVLHGGNLVYSAPTSAGKTLVS
ELLILKRVLETKRKALFILPFVSVAKEKMHYLQSVFEEAGIRVEGYMGSTSAAGGFTTLD
VAVCTIEKANSLINRLIEENSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQN
TSGSLSEGVQIIGMSATLPNLSLLASWLSADLYQTDYRPVPLQEHLKVGCNIYDKSLSVV
RQFAPALNIKGDDEHIVSLCYETVNEGHSVLLFCPSKNWCEKLADTIARAFFNLRHADLQ
GEAVPQPVCLDTEGLDDVIAQLRRTPAGLDPILQCTVPWGVAFHHAGLTFDERDVLEGAF
RQGLIRVLAATSTLSSGVNLPARRVIIRTPTFNGRLLDPLTYNQMAGRAGRKGVDTKGES
VLVCKQNERQKGISLLRGVLQPISSCLVRREGEGVTTSMLRAILEIIVGGVASSPQDVRL
YASCSLLAASMKSDNKTESNEQTSKGAIEACVEWLMGNEFISIQQDGQDGQYCPTQLGAA
TLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLISPLYAEWTTIDWYQFFCLWEQMP
SSMKRVAELVGVQEGFLARSVSGKLVAKTEKQLRQMAIHKRFFTTLVLQDLVSEVPLGTV
ASKYNCNRGQLQSLQQSASTYAGMVTVFCKRLGWHNMELLLSQYQTRLSFGVQRELVDLV
RISLLNAMRARALYAQGLCTVAEVARATVPDVEKALRNAIPFKSSKRAVDESEMEAAERR
NLRCVWVTGGRALTEQEAAAEIVSEARLLLQEDLAQLGVHWDPSILPPQSSSESSSDDYT
SGDSDASSASYVSPHQSPTDRTKEHQARKRRDKRKVSENHGEEVRRDAEIDKRITDGKDV
LEGKTVKQDVMKSELCEVLVERSDERIKAKPKTSGQNDAEHAEKKQENKGEMLEKNKIQE
EEMNKGNKQIGEANLPHLNTPAPERSLTQELADIIPSPLPQLPPQAQPLSSPTPAPRFRP
LISRLEPQQSTAKADFSSSPLQPGTLKHSIALSKILQSIQTDRALQDQLQPADRLHSKAQ
NRTPVTSQEKSDDSSTPTHADLPTSSPTSAPLFTPEAKRRRTEARGVDTFSSPELYANSR
TDEVGQDGVEEESFSKSFDLDTQTERIIAQHEFSGIAAETDEGVEPLRVQEEDSVEGAEL
DRRNEAEGLQTVSPRFNISVTESQLELILNTNHKISPSPAGRRNDQDKDQNTRDDRLPNN
NKAAAESPNRSSSFLFDSMHDSLLLDALQPNQVLEPAGEKESPSLRPAPSAQQRRLSEFL
ANQEAEEQEAVQWGESFFNLSEWGDSLLVGEHFLERQSLLRHAERTEENQELQRPNEDED
LILKSQNESDEEKQGNDQPCNQNDQQFTEKGLDEGKTAQQVEEKTNEEKENNGENLVVKH
LLVQNSLESAFYCSPGLQEIFDRWPSMSDQPGAAASTTADASELPRPATHLDRKRKKSQH
PDASQTVQVTERPGSAGDLIPPTQATPPVTPRVKLTTSSVHTPVVAQPLKQSTPSNRLQE
KRATSHAANSHLKAAVSFFDSRLQKNLCLPPESVASPPSPQPRPRSDTESSLSPEGFSLQ
LSQEASICCSNSGSFSIIDVASDRRLFDTFIKEWKTKERFSIALACEKRECGQHPEDEIG
GKHKRASEAHLKLDGFPVRDTEGLTLTGLSVCWGARDAYYISLQQEQRKGLSSSLAPPPL
DDALPVRERLEQMKVCLSGQLTRLKGRVAVVYNIIKVYKRLVQSCGISLEGNCEDPKVAC
WLLDPGSEERTLPNMVTVYCPEELPLLDGLGNALSHCPRVRAATKSVLIHAVMNHLSGLL
EQDGTLDAFRRIEMPSQVCLALLELNGVGFSVEECERQKHVMQAKLSALEAEAYSLAGHT
FSLTSVDDIAQVLFLELHLPPNGDISGPRNKKTLGYTRRGGGRVRLGKQFSTTKDVLEKL
RPLHPLPAVVLEWRRITNALTKVVFPLQREKQYHPTLDMDRIYPITQTHTATGRVSFTEP
NIQNVPKDFEISMPTEVGESPPSQGGFQMPNKLGKWRNSAAPFPAAAGQGPAFSVSMRHA
FIPFSGGMILAADYSQLELRVLAHLSKDQRLLQVLNGGADVFRCIAAEWKNVDPESVQDS
LRQQAKQICYGIIYGMGAKSLGEQMGVEENDAACYIESFKARYKGINTFLKQTVKKCLKG
GYVQTLMGRRRYLAGISSTNPHVKAHAERQAVNTTVQGSAADIVKLATINIQKRLRKTYP
AAPLSHQHTHSAHGHRRIGTSRLRGAYFVLQLHDELIYETTEQDLIQVAQIVKREMESAV
KLYVKLKAKVKVGPSWRNLQDLDI
NT seq 7995 nt   +upstreamnt  +downstreamnt
atgacctcgggttctctgaaaaagaaaagttacctgggacagcaccagatcaagaagaag
acgagaatcctaggcaacaatgagccactggacggagaaatgctgctgctgcagacaaca
tcagggaaaacaaatagacctataagcatgaataaatgtagcctcatgggtggagcagtt
cctcttccattgggcgattccactttggcgcttgatgaagaaatgctacaggttatggat
gctgttgatctttctaagagtgaagttaaaagggatgttaaggaaaaacacatttcagat
ccttttcctcctccacgacccactacaccgaatgcactcagcaaaatggagagaaactct
ggaatgatgaaggaccgggaaactattccttacacaaatgggggggttgatcctctgcag
agaggctgtagatctagaggggattctaacaaaccaggatggagcgctgactgcaaagac
ttggctcagaagcttcttttcagtgaggactctggtgaagtagaccatcctcagagagac
cagcagaataaccattcaaatcatctctctgcctctgtctgcactctgccttgtatagaa
acaagtaacagtcgaaaagcagacggctccagcaagcagaaactcagaagacgaaactct
cctcccagtgatcagaaagctaactcgagtgagaacatcaatccatctctggatgtatct
acaaaatatattttattcagtcctacccgcctcgcagcagccaggcaaagggccaaactt
cagcagtcgttacagaatcagtctgcatctgtgctcacagtgcccagcggcctggagctc
agcatgctcaacgacacacttcctccaccaggcgtggccttgtgtgctcctgagcagcag
gctgaaaagctgctgttatccagctggggcttaccaaagcctgttctggagcgctaccag
aaacacggagtcactcagatgtttgaatggcaggctcagtgcctcactgttggacaggtt
ttgcatggagggaaccttgtgtactctgcccccactagtgctggcaaaactctggtttcg
gagctgctgatcctgaagcgcgtgctggagaccaaaagaaaagcacttttcattttgcca
tttgtgtctgtggccaaagaaaagatgcactaccttcagagcgtgtttgaagaggctggg
attcgtgtggagggctacatggggagtacttcggctgcaggagggttcaccacgttggat
gtggctgtttgcaccatagaaaaagccaattctttaattaacagactgattgaagaaaat
agcatgggtctactaggcatggtggtggttgacgagttgcatatggttggagattccgga
aggggatacctactggaactgctcttaaccaaaatccgctacatcgcacagaagcagaac
acatcagggtctctttcagagggcgtacagatcatcggtatgagtgccactttaccaaat
ctctctctgctggccagctggttgagtgcagatttataccaaacagattacaggcctgta
cccctgcaggaacatctcaaagtgggatgcaacatatacgacaagagcctttctgtggtt
cgacagtttgcccctgctcttaatattaagggtgacgacgagcatattgtgagcttgtgt
tatgaaactgtgaacgaaggccactctgtgctgctgttctgtccctcgaagaactggtgt
gaaaagctggctgataccatcgccagagcattctttaacctcagacatgcagatcttcag
ggagaagctgtgcctcagcctgtgtgtctagatacagagggcttagatgatgttatagct
cagctgaggcgaactccagctggtcttgatcccatcctgcagtgcactgtcccatggggg
gtggccttccaccacgccgggttgacatttgatgagcgggatgtgctggagggagctttt
cgtcagggattgatcagagttctggctgccacctccaccctttcatctggagtcaatctt
ccggctcgcagggtcatcattcgaactccaacttttaacggacgcttgctggacccgctc
acatacaatcagatggccggacgagcagggagaaaaggagtggacaccaaaggtgaaagt
gtgcttgtgtgtaagcagaacgagcgtcaaaagggtattagtctccttaggggagttctt
cagccaatcagcagctgcctggtgagacgagaaggcgagggtgtaaccaccagcatgctg
agagcgatcctggagattattgttggaggtgtggccagctctccacaggatgtgaggttg
tacgcctcatgctcccttttagctgccagcatgaaaagtgacaacaagaccgaatctaat
gagcagaccagcaaaggagctattgaggcttgtgttgaatggctgatgggaaatgaattt
attagtattcaacaggatgggcaagatgggcagtattgtccaacccaactgggggctgcc
actctttcttcatccctctctcctccagaggctttgggaatatttgcagacctccaacgg
gcaatgaagggattcgtactcgaaaatgatttgcacattctgtatctgatttcaccactg
tatgcggagtggactacaatagattggtatcagtttttctgcctgtgggagcagatgcct
tcctcgatgaagagagtggcggagctggttggtgtccaggaaggctttcttgcacgatct
gtcagtggcaaacttgttgccaagactgaaaagcagctcagacagatggccattcacaag
cggtttttcacaacccttgttctccaggatctggtcagcgaagttcctctgggaactgtt
gcttctaagtacaactgcaatcgaggacagctgcagtctctccagcaatctgcttccaca
tatgcaggaatggtgaccgtgttctgcaagcgtctgggctggcataacatggagctgctg
ttgtctcagtaccagaccaggctgagctttggggtccagagagagctcgtcgatctggtt
cggatttcccttctgaacgcaatgcgagccagagcgctctacgcccaggggctctgcact
gtagctgaagtagcacgggccacagttcctgacgtggagaaagcgttaaggaacgccatc
ccattcaagagttctaaacgagcggtggatgagagcgagatggaggcggcggagaggcgg
aacctgcgctgtgtgtgggtcaccggtggacgggctctgacagaacaggaagcagctgct
gagatcgtctcggaagcgaggctcctccttcaagaggacctggctcagcttggagttcac
tgggatccatcaatacttcctccacagtcctcctctgaaagtagctctgacgattacacc
agtggggattcagatgcttcgtctgcctcttacgtcagcccacaccagtcaccaacagat
aggactaaagagcatcaagcgagaaagcgcagggataagaggaaagtcagtgagaatcat
ggagaggaggttaggagagatgcagaaatcgacaaaaggattactgatgggaaagacgtg
ttagaaggaaaaacagtgaagcaagatgtgatgaaatctgaattatgtgaagttctagta
gaaagatctgatgaaagaataaaagcaaagccaaagacatcaggccaaaatgatgctgaa
catgcagagaaaaaacaggaaaacaaaggggaaatgttggaaaaaaacaaaatacaagag
gaagagatgaataaaggaaacaaacaaattggagaagcaaatcttccccatttaaatacc
cctgctcctgaaaggagcctaacacaagagcttgctgacattattcccagccctctccct
cagctgccccctcaggctcagcccctgtcctctccaaccccggccccaaggttcagaccc
ctgatttctcgcttagagccacaacaaagcacagcaaaagcagacttttcttcatcccct
ctgcagccagggacactaaaacactcgatcgcattaagcaaaatcctccagtcaatacaa
actgatcgggctctgcaggatcagttgcagcctgctgacagattacactcaaaagcccaa
aacagaacgcctgtaacctctcaagaaaagtcagatgatagttctacacctacgcatgca
gatttgccaacatcttctcctacctctgctcccctgttcactcccgaggccaaacgaaga
agaaccgaagccagaggggtagatacgttttcatctcctgagctgtacgcaaacagtagg
actgatgaagtggggcaggatggtgtggaagaagaaagtttcagcaaaagctttgacttg
gacactcagacagaaagaattatagctcagcatgagttcagtggcatagctgcagaaaca
gatgagggagtagaaccgctgagggtacaagaggaggattcagtagagggagctgaactt
gacagaagaaatgaagctgaaggccttcagacagtgtctcccagattcaatatttctgtg
acagaaagccaactggagctcatccttaacacaaaccacaaaatatctcccagtccagct
ggaagaagaaacgaccaagacaaagaccaaaacacacgcgatgatcggctccctaacaat
aacaaggctgcagcagagagtccaaacagaagcagcagcttcctgttcgacagcatgcac
gacagtcttctcctggacgctctgcaaccaaaccaggtacttgaaccagcaggtgaaaaa
gaatctcctagcctacgtcccgctccgtcagcccagcagaggcgactcagtgagtttctc
gccaatcaggaggcggaggagcaggaggcggtccagtggggcgagtccttcttcaatctg
tccgagtggggggactcgctcttggtgggtgaacactttctggagaggcagagtttactg
agacacgcagagagaactgaagaaaaccaagagctgcagcgaccaaacgaagatgaagat
ctgattttaaaatcccaaaatgagtctgacgaggagaaacaaggcaatgatcagccttgc
aatcaaaatgatcaacaatttactgagaaaggtttagatgagggcaaaactgcacagcag
gttgaagagaaaaccaatgaagaaaaagaaaataatggggaaaatttagttgtcaaacac
ctgcttgtccaaaattcacttgaaagtgctttttattgcagccctgggttacaggaaatc
tttgaccgctggcctagtatgtctgaccagccaggtgccgctgcttcaaccacagcagat
gcttcagagttaccccgtccagcgacacatctggacagaaagaggaaaaaatcccaacat
cctgacgcttctcaaacggtacaggtcacagagagaccaggctctgccggtgaccttatt
cccccaacgcaggccacgccccctgtcacaccaagagtgaaactaaccacctcctctgtc
cacacacctgtcgtcgctcagcctctcaaacagtcgacgccctcaaaccgtcttcaagaa
aaacgcgccacatcccacgctgcgaacagtcacttgaaagcagctgtttcgttttttgat
agcagactgcagaaaaacctctgcctccctccagagagtgtcgcctctccaccgtccccc
cagcccagacctcgatctgacaccgagtcctctttgagccccgagggtttctctctccag
ctgtcccaggaggcctccatctgttgcagcaactctgggagcttttccatcatagacgtg
gcgagcgacagacgcctttttgatactttcattaaagagtggaaaacaaaagagcggttc
tctattgctttggcttgcgagaagagagagtgcgggcagcaccctgaggatgaaatagga
gggaaacacaagagagcatcagaagctcatctaaagcttgatggttttccagtaagagac
accgaaggccttactttgactggactttctgtctgctggggagccagagatgcatattat
atttctctacagcaggagcagagaaaaggtctgagctccagtctggctcctcctccactc
gatgatgctctgccggtaagggaaaggctggagcagatgaaggtctgtctgagcggacag
ttgacccgtctcaagggccgtgtggccgtcgtgtataacatcatcaaggtgtacaagagg
ctggtacagagctgtggcatcagcctggagggaaattgtgaggatccaaaggttgcctgc
tggctgctggatcctggcagtgaggaaagaactcttcccaacatggtgactgtctattgt
cccgaagaattacccctgctggatggtctcgggaacgcactttcccactgtcctcgagtc
agggctgcaaccaagagcgtcctcatacatgctgtgatgaaccatctctccggtctgctg
gagcaagacggcacactggatgcgtttaggaggatagagatgccttcccaggtttgtctg
gctctgttagaactgaacggagttggcttcagcgtggaggagtgtgagagacaaaaacat
gtgatgcaggccaaactgtcggcgctggaagctgaggcttacagcctggctggacacacc
ttctccctcacaagtgttgacgacatagcacaggtgttgtttttggagcttcatctgcct
ccaaacggagacataagtggaccaagaaataagaagactctgggttacaccaggagaggc
ggcggcagagtacgacttgggaagcagttcagcactaccaaggatgttttagaaaaactt
cgtcccctgcaccctttgccagctgtagttctggagtggcggagaatcaccaacgccttg
actaaagtggtgtttcccctgcagagggagaagcagtatcatcctaccttggatatggac
agaatataccccatcacacaaacacacacggcaacaggtagagtgagcttcactgagcca
aacatccagaacgtccccaaagattttgagatttccatgcctacagaggtcggagaaagc
cctccttctcagggtggcttccagatgcccaacaaactgggaaagtggagaaactctgct
gctccttttcctgcagctgcaggacaaggcccggccttctccgtcagcatgagacatgca
tttattcccttctcaggaggaatgattctggcagctgattactctcaactggaactgaga
gtgctggctcacctctcgaaggatcagcgcctcctgcaggtgctgaatggaggagctgac
gtgtttcgttgcattgctgctgagtggaaaaatgttgacccagagtctgtgcaggacagc
ctcagacagcaggcaaaacagatttgctacggcatcatctacggaatgggagcaaagtca
cttggggagcaaatgggagtagaggagaacgacgcagcctgctacatcgagagtttcaaa
gcacgatacaaagggatcaacacttttcttaaacagactgtaaagaagtgcttaaagggc
ggctatgttcagacgctgatgggccgccggagatatttagctgggatctccagcacaaat
ccacacgtcaaagctcatgcagagcggcaggcggtgaacacgacggtgcagggttcggca
gccgacatcgtcaaactggctaccatcaacatccagaaacggttacgaaaaacgtatcct
gcggccccattgtctcaccaacacacacactcggctcacggtcaccgcagaattgggacg
tctcggctcaggggagcctattttgtcctccagctgcatgatgagctcatctacgaaacc
acagaacaggatctcatacaggttgcacagatagtcaaaagggagatggagtcagcagtg
aagctgtatgtgaagctcaaagccaaagtcaaagttggacccagttggagaaacctacag
gacctcgacatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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